Now showing items 1-5 of 5

    • Comparative genomic analysis of two-component regulatory proteins in pseudomonas syringae 

      Lavín Trueba, José Luis Upna; Kiil, Kristoffer; Resano, Ohiana Upna; Ussery, David W.; Oguiza Tomé, José Antonio Upna (BioMed Central, 2007)   Artículo / Artikulua  OpenAccess
      Background: Pseudomonas syringae is a widespread bacterial plant pathogen, and strains of P. syringae may be assigned to different pathovars based on host specificity among different plant species. The genomes of P. ...
    • Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis 

      Fernández Fueyo, Elena; Ruiz Dueñas, Francisco J.; Ferreira, Patricia; Floudas, Dimitrios; Lavín Trueba, José Luis Upna; Oguiza Tomé, José Antonio Upna; Pérez Garrido, Gumersinda Upna; Pisabarro de Lucas, Gerardo Upna; Ramírez Nasto, Lucía Upna; Santoyo Santos, Francisco Upna (National Academy of Sciences, 2012)   Artículo / Artikulua  OpenAccess
      Efficient lignin depolymerization is unique to the wood decay basidiomycetes, collectively referred to as white rot fungi. Phanerochaete chrysosporium simultaneously degrades lignin and cellulose, whereas the closely related ...
    • Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion 

      Martínez, Diego; Challacombe, Jean; Morgenstern, Ingo; Hibbett, David; Schmoll, Monika; Kubicek, Christian P.; Ferreira, Patricia; Pisabarro de Lucas, Gerardo Upna; Lavín Trueba, José Luis Upna; Oguiza Tomé, José Antonio Upna (National Academy of Sciences, 2009)   Artículo / Artikulua  OpenAccess
      Brown-rot fungi such as Postia placenta are common inhabitants of forest ecosystems and are also largely responsible for the destructive decay of wooden structures. Rapid depolymerization of cellulose is a distinguishing ...
    • Genomics and transcriptomics characterization of genes expressed during postharvest at 4 degrees C by the edible basidiomycete Pleurotus ostreatus 

      Ramírez Nasto, Lucía Upna; Oguiza Tomé, José Antonio Upna; Pérez Garrido, Gumersinda Upna; Lavín Trueba, José Luis Upna; Omarini, Alejandra; Santoyo Santos, Francisco Upna; Alfaro Sánchez, Manuel Upna; Castanera Andrés, Raúl Upna; Parenti, Alejandra Upna; Muguerza Domínguez, Elaia Upna; Pisabarro de Lucas, Gerardo Upna (Viguera Editores, S. L., 2011)   Artículo / Artikulua  OpenAccess
      Pleurotus ostreatus is an industrially cultivated basidiomycete with nutritional and environmental applications. Its genome, which was sequenced by the joint Genome Institute, has become a model for lignin degradation ...
    • VerSeDa: vertebrate secretome database 

      Cortázar, Ana R.; Oguiza Tomé, José Antonio Upna; Aransay, Ana M.; Lavín Trueba, José Luis Upna (Oxford University Press, 2017)   Artículo / Artikulua  OpenAccess
      Based on the current tools, de novo secretome (full set of proteins secreted by an organism) prediction is a time consuming bioinformatic task that requires a multifactorial analysis in order to obtain reliable in silico ...