• Comparative genomics of Coniophora olivacea reveals different patterns of genome expansion in Boletales 

      Castanera Andrés, Raúl Upna; Pérez Garrido, Gumersinda Upna; López Varas, Leticia; Amselem, Joëlle; LaButti, Kurt; Singan, Vasanth; Lipzen, Anna; Haridas, Sajeet; Barry, Kerrie; Grigoriev, Igor V.; Pisabarro de Lucas, Gerardo Upna; Ramírez Nasto, Lucía Upna (BioMed Central, 2017)   Artículo / Artikulua  OpenAccess
      Background: Coniophora olivacea is a basidiomycete fungus belonging to the order Boletales that produces brown-rot decay on dead wood of conifers. The Boletales order comprises a diverse group of species including saprotrophs ...
    • Computational prediction of protein-coding gene and annotation of DNA sequences with agronomic interest in Pleurotus ostreatus (Oyster Mushroom) 

      Palma Dovis, Leopoldo Upna; Peñas Parrila, María Manuela; Ramírez Nasto, Lucía Upna; Pisabarro de Lucas, Gerardo Upna (Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa, 2006)   Contribución a congreso / Biltzarrerako ekarpena  OpenAccess
      Pleurotus ostreatus, commonly known as oyster mushroom, is a commercially important edible fungus with interesting biotechnological properties. Quantitative trait loci (QTL) analyses are rare in fungi and little is known ...
    • Enzymatic characterization of a monokaryon population of the edible mushroom, Pleurotus ostreatus with a view to genetic improvement 

      Terrón, María del Carmen; López, María; Carbajo, José M.; Pisabarro de Lucas, Gerardo Upna; Ramírez Nasto, Lucía Upna; González Aldo, E. (Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa, 2006)   Contribución a congreso / Biltzarrerako ekarpena  OpenAccess
      In this work the lignocellulolytic enzymes produced by the edible mushroom Pleurotus ostreatus var. florida were studied. The objective was to know their relationship with the degradation of the biopolymers present in the ...
    • Genetic breeding of edible mushrooms: from the genome to the production of new varieties of Pleurotus ostreatus 

      Pisabarro de Lucas, Gerardo Upna; Peñas Parrila, María Manuela; Pérez Garrido, Gumersinda Upna; Park, Sang-Kyu; Eizmendi Goicoechea, Arantza; Parada Albarracín, Julián Andrés; Palma Dovis, Leopoldo Upna; Idareta Olagüe, Eneko Upna; Jurado Cabanillas, Javier; Castellón Gadea, Jordi; Ramírez Nasto, Lucía Upna (Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa, 2006)   Contribución a congreso / Biltzarrerako ekarpena  OpenAccess
      The breeding of new varieties of industrially cultivated edible mushrooms must proceed in the framework defined by the breeding objectives, the biological characteristics of the material and the legal and cultural ...
    • Genomics and transcriptomics characterization of genes expressed during postharvest at 4 degrees C by the edible basidiomycete Pleurotus ostreatus 

      Ramírez Nasto, Lucía Upna; Oguiza Tomé, José Antonio Upna; Pérez Garrido, Gumersinda Upna; Lavín Trueba, José Luis Upna; Omarini, Alejandra; Santoyo Santos, Francisco Upna; Alfaro Sánchez, Manuel Upna; Castanera Andrés, Raúl Upna; Parenti, Alejandra Upna; Muguerza Domínguez, Elaia Upna; Pisabarro de Lucas, Gerardo Upna (Viguera Editores, S. L., 2011)   Artículo / Artikulua  OpenAccess
      Pleurotus ostreatus is an industrially cultivated basidiomycete with nutritional and environmental applications. Its genome, which was sequenced by the joint Genome Institute, has become a model for lignin degradation ...
    • Highly expressed captured genes and cross-kingdom domains present in Helitrons create novel diversity in Pleurotus ostreatus and other fungi 

      Castanera Andrés, Raúl Upna; Pérez Garrido, Gumersinda Upna; López Varas, Leticia Upna; Sancho, Rubén; Santoyo Santos, Francisco Upna; Alfaro Sánchez, Manuel Upna; Gabaldón Estevan, Juan Antonio; Pisabarro de Lucas, Gerardo Upna; Oguiza Tomé, José Antonio Upna; Ramírez Nasto, Lucía Upna (BioMed Central, 2014)   Artículo / Artikulua  OpenAccess
      Background: Helitrons are class-II eukaryotic transposons that transpose via a rolling circle mechanism. Due to their ability to capture and mobilize gene fragments, they play an important role in the evolution of their ...
    • Identification and functional characterisation of ctr1, a Pleurotus ostreatus gene coding for a copper transporter 

      Peñas Parrila, María Manuela; Azparren Larraya, María Goretti; Domínguez, A.; Sommer, H.; Ramírez Nasto, Lucía Upna; Pisabarro de Lucas, Gerardo Upna (Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa, 2006)   Contribución a congreso / Biltzarrerako ekarpena  OpenAccess
      Copper homeostasis is primordial for life maintenance and especially relevant for ligning-degrading fungi whose phenol-oxidase enzymes depend on this micronutrient for their activity. In this paper we report the identification of ...
    • Isolation, molecular characterization and location of telomeric sequences of the basidiomycete Pleurotus ostreatus var. florida 

      Pérez Garrido, Gumersinda Upna; Pisabarro de Lucas, Gerardo Upna; Ramírez Nasto, Lucía Upna (Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa, 2006)   Contribución a congreso / Biltzarrerako ekarpena  OpenAccess
      The white rot fungus Pleurotus ostreatus is an edible basidiomycete of increasing biotechnological interest due to its ability to degrade both wood and chemicals related to lignin degradation products. Telomeres are ...
    • Mapping the Pleurotus ostreatus genome 

      Castellón Gadea, Jordi; Pisabarro de Lucas, Gerardo Upna; Ramírez Nasto, Lucía Upna (Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa, 2006)   Contribución a congreso / Biltzarrerako ekarpena  OpenAccess
      Pleurotus ostreatus is a commercially important edible mushroom commonly known as oyster mushroom which has also important biotechnical applications. Industrial production of P.ostreatus is based on a solid fermentation process ...
    • Molecular characterization of A cellobiohydrolase gene family in the fungus Pleurotus ostreatus 

      Eizmendi Goicoechea, Arantza; Sannia, G.; Ramírez Nasto, Lucía Upna; Pisabarro de Lucas, Gerardo Upna (Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa, 2006)   Contribución a congreso / Biltzarrerako ekarpena  OpenAccess
      Cellulose is the most abundant biological polymer on Earth. Its chemical composition consists of D-glucose units linked by β-1,4- glycosidic bonds forming linear polymeric chains with a reducing and a non-reducing ...
    • Non-additive transcriptional profiles underlie dikaryotic superiority in Pleurotus ostreatus laccase activity 

      Castanera Andrés, Raúl Upna; Omarini, Alejandra; Santoyo Santos, Francisco Upna; Pérez Garrido, Gumersinda Upna; Pisabarro de Lucas, Gerardo Upna; Ramírez Nasto, Lucía Upna (Public Library of Science, 2013)   Artículo / Artikulua  OpenAccess
      Background: The basidiomycete Pleurotus ostreatus is an efficient producer of laccases, a group of enzymes appreciated for their use in multiple industrial processes. The aim of this study was to reveal the molecular basis ...
    • Nutritional value of protein from vegetative mycelia of edible mushroom Pleurotus ostreatus 

      Parada Albarracín, Julián Andrés; Urdaneta, Elena; Marzo Pérez, Florencio Upna; Ramírez Nasto, Lucía Upna; Pisabarro de Lucas, Gerardo Upna (Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa, 2006)   Contribución a congreso / Biltzarrerako ekarpena  OpenAccess
      The present work was designed to study the effects of supplementation a control diet with P. ostreatus mycelium for evaluation a nutritional value of mycoprotein and possible cholesterol lowering.
    • A secretomic view of woody and nonwoody lignocellulose degradation by Pleurotus ostreatus 

      Fernández Fueyo, Elena; Ruiz Dueñas, Francisco J.; López Lucendo, María F.; Pérez Boada, Marta; Rencoret, Jorge; Gutiérrez, Ana; Pisabarro de Lucas, Gerardo Upna; Ramírez Nasto, Lucía Upna; Martínez, Ángel T. (BioMed Central, 2016)   Artículo / Artikulua  OpenAccess
      Background: Pleurotus ostreatus is the second edible mushroom worldwide, and a model fungus for delignification applications, with the advantage of growing on woody and nonwoody feedstocks. Its sequenced genome is ...
    • Selection of Pleurotus ostreatus strains in a genetic breeding program 

      Idareta Olagüe, Eneko Upna; Jurado Cabanillas, Javier; Pisabarro de Lucas, Gerardo Upna; Ramírez Nasto, Lucía Upna (Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa, 2006)   Contribución a congreso / Biltzarrerako ekarpena  OpenAccess
      The basidiomycete Pleurotus ostreatus, commonly known as oyster mushroom, is the second largest edible mushroom crop behind the white button mushroom, Agaricus bisporus. It accounts for nearly one-quarter of the ...
    • Somatic transposition and meiotically driven elimination of an active helitron family in Pleurotus ostreatus 

      Borgognone, Alessandra Upna; Castanera Andrés, Raúl; Muguerza Domínguez, Elaia Upna; Pisabarro de Lucas, Gerardo Upna; Ramírez Nasto, Lucía Upna (Oxford University Press, 2017)   Artículo / Artikulua  OpenAccess
      Helitrons constitute a superfamily of DNA transposons that were discovered in silico and are widespread in most eukaryotic genomes. They are postulated to mobilize through a “rollingcircle” mechanism, but the experimental ...
    • Transposable elements in basidiomycete fungi: dynamics and impact on genome architecture and transcriptional profiles 

      Castanera Andrés, Raúl Upna (2017)   Tesis doctoral / Doktoretza tesia  OpenAccess
      Transposable elements (TE), also known as mobile elements or transposons, are enigmatic genetic units that have played important roles in the evolution of eukaryotes. Their impact on genome architecture and phenotypic ...
    • Transposable elements versus the fungal genome: impact on whole-genome architecture and transcriptional profiles 

      Castanera Andrés, Raúl Upna; López Varas, Leticia Upna; Borgognone, Alessandra Upna; LaButti, Kurt; Lapidus, Alla; Schmutz, Jeremy; Grimwood, Jane; Pérez Garrido, Gumersinda Upna; Pisabarro de Lucas, Gerardo Upna; Grigoriev, Igor V.; Stajich, Jason E.; Ramírez Nasto, Lucía Upna (Public Library of Science, 2016)   Artículo / Artikulua  OpenAccess
      Transposable elements (TEs) are exceptional contributors to eukaryotic genome diversity. Their ubiquitous presence impacts the genomes of nearly all species and mediates genome evolution by causing mutations and chromosomal ...
    • VI Meeting on Genetics and Cellular Biology of Basidiomycetes (GCBB-VI) 

      Pisabarro de Lucas, Gerardo, ed. lit. Upna; Ramírez Nasto, Lucía, ed. lit. Upna (Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa, 2006)   Libro / Liburua  OpenAccess
      This volume summarizes the scientific communications presented at the 6th Meeting on Genetics and Cellular Biology of Basidiomycetes (GCBB-VI) held in Pamplona (Spain) from June 3rd to 6th, 2005. GCBB-VI continues the ...