• Comparative genomics of Coniophora olivacea reveals different patterns of genome expansion in Boletales 

      Castanera Andrés, Raúl Upna Orcid; Pérez Garrido, María Gumersinda Upna Orcid; López Varas, Leticia Upna; Amselem, Joëlle; LaButti, Kurt; Singan, Vasanth; Lipzen, Anna; Haridas, Sajeet; Barry, Kerrie; Grigoriev, Igor V.; Pisabarro de Lucas, Gerardo Upna Orcid; Ramírez Nasto, Lucía Upna Orcid (BioMed Central, 2017)   Artículo / Artikulua  OpenAccess
      Background: Coniophora olivacea is a basidiomycete fungus belonging to the order Boletales that produces brown-rot decay on dead wood of conifers. The Boletales order comprises a diverse group of species including saprotrophs ...
    • Highly expressed captured genes and cross-kingdom domains present in Helitrons create novel diversity in Pleurotus ostreatus and other fungi 

      Castanera Andrés, Raúl Upna Orcid; Pérez Garrido, María Gumersinda Upna Orcid; López Varas, Leticia Upna; Sancho, Rubén; Santoyo Santos, Francisco Upna; Alfaro Sánchez, Manuel Upna Orcid; Gabaldón Estevan, Juan Antonio; Pisabarro de Lucas, Gerardo Upna Orcid; Oguiza Tomé, José Antonio Upna Orcid; Ramírez Nasto, Lucía Upna Orcid (BioMed Central, 2014)   Artículo / Artikulua  OpenAccess
      Background: Helitrons are class-II eukaryotic transposons that transpose via a rolling circle mechanism. Due to their ability to capture and mobilize gene fragments, they play an important role in the evolution of their ...
    • Transposable elements versus the fungal genome: impact on whole-genome architecture and transcriptional profiles 

      Castanera Andrés, Raúl Upna Orcid; López Varas, Leticia Upna; Borgognone, Alessandra Upna Orcid; LaButti, Kurt; Lapidus, Alla; Schmutz, Jeremy; Grimwood, Jane; Pérez Garrido, María Gumersinda Upna Orcid; Pisabarro de Lucas, Gerardo Upna Orcid; Grigoriev, Igor V.; Stajich, Jason E.; Ramírez Nasto, Lucía Upna Orcid (Public Library of Science, 2016)   Artículo / Artikulua  OpenAccess
      Transposable elements (TEs) are exceptional contributors to eukaryotic genome diversity. Their ubiquitous presence impacts the genomes of nearly all species and mediates genome evolution by causing mutations and chromosomal ...
    • Transposon-associated epigenetic silencing during Pleurotus ostreatus life cycle 

      Borgognone, Alessandra Upna Orcid; Castanera Andrés, Raúl Upna Orcid; Morselli, Marco; López Varas, Leticia Upna; Rubbi, Liudmilla; Pisabarro de Lucas, Gerardo Upna Orcid; Pellegrini, Matteo; Ramírez Nasto, Lucía Upna Orcid (Oxford University Press, 2018)   Artículo / Artikulua  OpenAccess
      Transposable elements constitute an important fraction of eukaryotic genomes. Given their mutagenic potential, host-genomes have evolved epigenetic defense mechanisms to limit their expansion. In fungi, epigenetic modifications ...
    • Validation of reference genes for transcriptional analyses in Pleurotus ostreatus by using reverse transcription-quantitative PCR 

      Castanera Andrés, Raúl Upna Orcid; López Varas, Leticia Upna; Pisabarro de Lucas, Gerardo Upna Orcid; Ramírez Nasto, Lucía Upna Orcid (American Society for Microbiology, 2015)   Artículo / Artikulua  OpenAccess
      Recently, the lignin-degrading basidiomycete Pleurotus ostreatus has become a widely used model organism for fungal genomic and transcriptomic analyses. The increasing interest in this species has led to an increasing ...

      El Repositorio ha recibido la ayuda de la Fundación Española para la Ciencia y la Tecnología para la realización de actividades en el ámbito del fomento de la investigación científica de excelencia, en la Línea 2. Repositorios institucionales (convocatoria 2020-2021).
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