Now showing items 1-20 of 160

    • Patho-adaptive evolution of Haemophilus spp. bacterial respiratory colonizing opportunistic pathogens 

      Moleres Apilluelo, Javier Upna (2018)   Tesis doctoral / Doktoretza tesia  OpenAccess
      Esta tesis doctoral se ha centrado en tres aspectos de la pato-adaptación de dos especies bacterianas relacionadas filogenéticamente, que colonizan de forma asintomática y también son patógenos oportunistas en los sistemas ...
    • Functional analysis of the RNA chaperone CspA in Staphylococcus aureus 

      Caballero Sánchez, Carlos Upna (2018)   Tesis doctoral / Doktoretza tesia  OpenAccess
      En esta tesis se pone de manifiesto que las chaperonas de RNA, como CspA, pueden interactuar de manera específica con estructuras de RNA, que a su vez pueden ser reconocidas por otras RBPs. Esto contribuye a un mejor ...
    • Estudio de las bases moleculares de la infección respiratoria por el patógeno bacteriano Haemophilus influenzae: efecto de la auxotrofía metabólica e implementación de un nuevo modelo experimental preclínico 

      Rodríguez Arce, Irene Upna (2018)   Tesis doctoral / Doktoretza tesia
      Este trabajo de tesis doctoral se centra en el estudio de las bases moleculares de la infección respiratoria por la bacteria Haemophilus influenzae, miembro del microbioma respiratorio humano y patógeno oportunista de ...
    • Transposon-associated epigenetic silencing during Pleurotus ostreatus life cycle 

      Borgognone, Alessandra Upna; Castanera Andrés, Raúl Upna; Morselli, Marco; López Varas, Leticia Upna; Rubbi, Liudmilla; Pisabarro de Lucas, Gerardo Upna; Pellegrini, Matteo; Ramírez Nasto, Lucía Upna (Oxford University Press, 2018)   Artículo / Artikulua  OpenAccess
      Transposable elements constitute an important fraction of eukaryotic genomes. Given their mutagenic potential, host-genomes have evolved epigenetic defense mechanisms to limit their expansion. In fungi, epigenetic modifications ...
    • Plasmid replicons from Pseudomonas are natural chimeras of functional, exchangeable modules 

      Bardají Goikoetxea, Leire Upna; Añorga García, Maite Upna; Ruiz Masó, José A.; Solar, Gloria del; Murillo Martínez, Jesús Upna (Frontiers Media, 2017)   Artículo / Artikulua  OpenAccess
      Plasmids are a main factor for the evolution of bacteria through horizontal gene exchange, including the dissemination of pathogenicity genes, resistance to antibiotics and degradation of pollutants. Their capacity to ...
    • Effect of feeding regime on composting in bins 

      Storino, Francesco Upna; Menéndez Villanueva, Sergio Upna; Muro Erreguerena, Julio Upna; Aparicio Tejo, Pedro María Upna; Irigoyen Iriarte, Ignacio Upna (Taylor & Francis, 2017)   Artículo / Artikulua  OpenAccess
      Composting in bins is one of the most practical home composting methods. There is currently a need for greater information to improve the management of the composting process and to create home composting programs, which ...
    • Four genes essential for recombination define GInts, a new type of mobile genomic island widespread in bacteria 

      Bardají Goikoetxea, Leire Upna; Echeverría Ancín, Myriam Upna; Rodríguez Palenzuela, Pablo; Martínez García, Pedro M.; Murillo Martínez, Jesús Upna (Nature Publishing Group, 2017)   Artículo / Artikulua  OpenAccess
      Integrases are a family of tyrosine recombinases that are highly abundant in bacterial genomes, actively disseminating adaptive characters such as pathogenicity determinants and antibiotics resistance. Using comparative ...
    • Knots untie: molecular determinants involved in knot formation Induced by Pseudomonas savastanoi in woody hosts 

      Caballo Ponce, Eloy; Murillo Martínez, Jesús Upna; Martínez Gil, Marta; Moreno Pérez, Alba; Pintado, Adrián; Ramos, Cayo (Frontiers Media, 2017)   Artículo / Artikulua  OpenAccess
      The study of the molecular basis of tree diseases is lately receiving a renewed attention, especially with the emerging perception that pathogens require specific pathogenicity and virulence factors to successfully colonize ...
    • Molecular characterization of Tunisian strains of Erwinia amylovora 

      Dardouri, Sana; Chehimi, Sonia; Murillo Martínez, Jesús Upna; Hajlaoui, Mohamed Rabeh (Italian Phytopathological Society, 2017)   Artículo / Artikulua  OpenAccess
      The present study focused on the molecular characterization of a collection of Erwinia amylovora isolates recovered from different outbreaks in Tunisia between 2012 and 2014. Analysis of 54 isolates, including the reference ...
    • Genome-wide association mapping of flowering and ripening periods in apple 

      Urrestarazu Vidart, Jorge Upna; Muranty, Hélène; Denancé, Caroline; Leforestier, Diane; Ravon, Elisa; Guyader, Arnaud; Guisnel, Rémi; Feugey, Laurence; Aubourg, Sébastien; Celton, Jean Marc; Daccord, Nicolas; Dondini, Luca; Gregori, Roberto; Lateur, Marc; Houben, Patrick; Ordidge, Matthew; Paprstein, Frantisek; Sedlak, Jiri; Nybom, Hilde; Garkava Gustavsson, Larisa; Troggio, Michela; Bianco, Luca; Velasco, Riccardo; Poncet, Charles; Théron, Anthony; Moriya, Shigeki; Bink, Marco C. A. M.; Laurens, François; Tartarini, Stefano; Durel, Charles Eric (Frontiers Media, 2017)   Artículo / Artikulua  OpenAccess
      Deciphering the genetic control of flowering and ripening periods in apple is essential for breeding cultivars adapted to their growing environments. We implemented a large Genome-Wide Association Study (GWAS) at the ...
    • Somatic transposition and meiotically driven elimination of an active helitron family in Pleurotus ostreatus 

      Borgognone, Alessandra Upna; Castanera Andrés, Raúl Upna; Muguerza Domínguez, Elaia Upna; Pisabarro de Lucas, Gerardo Upna; Ramírez Nasto, Lucía Upna (Oxford University Press, 2017)   Artículo / Artikulua  OpenAccess
      Helitrons constitute a superfamily of DNA transposons that were discovered in silico and are widespread in most eukaryotic genomes. They are postulated to mobilize through a “rollingcircle” mechanism, but the experimental ...
    • VerSeDa: vertebrate secretome database 

      Cortázar, Ana R.; Oguiza Tomé, José Antonio Upna; Aransay, Ana M.; Lavín Trueba, José Luis Upna (Oxford University Press, 2017)   Artículo / Artikulua  OpenAccess
      Based on the current tools, de novo secretome (full set of proteins secreted by an organism) prediction is a time consuming bioinformatic task that requires a multifactorial analysis in order to obtain reliable in silico ...
    • Biofuncionalización de nanoestructuras para aplicación en sistemas de detección 

      Ciáurriz Gortari, Paula (2017)   Tesis doctoral / Doktoretza tesia  OpenAccess
      La presente tesis doctoral, enmarcada en el campo de nanobiotecnología, presenta el desarrollo de diversas estrategias de biofuncionalización de nanoestructuras con diferentes propiedades con el fin de ser aplicadas en ...
    • Biología de plásmidos y dinámica génica en el complejo Pseudomonas syringae 

      Añorga García, Maite Upna (2017)   Tesis doctoral / Doktoretza tesia  OpenAccess
      La mayoría de las cepas de Pseudomonas syringae posee uno o más plásmidos nativos tipo PFP, que suelen albergar genes adaptativos y que facilitan el intercambio de los mismos entre poblaciones bacterianas. P. syringae pv. ...
    • Genomic, transcriptomic and proteomic analysis of Pleurotus ostreatus secreted proteins 

      Alfaro Sánchez, Manuel Upna (2017)   Tesis doctoral / Doktoretza tesia  OpenAccess
      The objective of this thesis is to study the proteins secreted by the edible and worldwide cultivated white rot basidiomycete fungus Pleurotus ostreatus with three major goals: to determine the set of proteins secreted ...
    • Transposable elements in basidiomycete fungi: dynamics and impact on genome architecture and transcriptional profiles 

      Castanera Andrés, Raúl Upna (2017)   Tesis doctoral / Doktoretza tesia  OpenAccess
      Transposable elements (TE), also known as mobile elements or transposons, are enigmatic genetic units that have played important roles in the evolution of eukaryotes. Their impact on genome architecture and phenotypic ...
    • Insights into c-di-GMP signaling and the PGA exopolysaccharide biological functions using Salmonella as a model organism 

      Echeverz Sarasúa, Maite Upna (2017)   Tesis doctoral / Doktoretza tesia  OpenAccess
      Salmonella es un patógeno alimentario de gran relevancia clínica capaz de adherirse a superficies y formar comunidades bacterianas embebidas en una matriz que ellas mismas producen denominadas biofilms. Esta matriz ...
    • Severe trimming and enhanced competition of laterals as a tool to delay ripening in Tempranillo vineyards under semiarid conditions 

      Santesteban García, Gonzaga Upna; Miranda Jiménez, Carlos Upna; Urrestarazu Vidart, Jorge Upna; Loidi Erviti, Maite Upna; Royo Díaz, José Bernardo Upna (Université de Bordeaux, 2017)   Artículo / Artikulua  OpenAccess
      Aim: An advance in grapevine phenological stages (including ripening) is occurring worldwide due to global warming and, in the hottest seasons, already results in a lack of synchrony between sugar and phenolic ripeness, ...
    • Lacanobia oleracea nucleopolyhedrovirus (LaolNPV): a new European species of alphabaculovirus with a narrow host range 

      Simón de Goñi, Oihane Upna; Erlandson, Martin A.; Frayssinet, Marie; Williams, Trevor Upna; Theilmann, David A.; Volkoff, Anne Nathalie; Caballero Murillo, Primitivo Upna (Public Library of Science, 2017)   Artículo / Artikulua  OpenAccess
      During an insect sampling program in alfalfa crops near Montpellier, France in 2011, Lacanobia oleracea larvae were collected that died due to nucleopolyhedrovirus infection (LaolNPV). This virus was subjected to molecular ...
    • Interference of iflavirus in SeMNPV as a biological control agent 

      Carballo Palos, Arkaitz Upna (2017)   Tesis doctoral / Doktoretza tesia  OpenAccess
      La rosquilla verde, Spodoptera exigua (Hübner) (Lepidoptera: Noctuidae), es una especie polífaga ampliamente distribuida por todas las zonas templadas del mundo, incluyendo España, donde se ya ha establecido, causando ...