Now showing items 1-10 of 10

    • Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis 

      Fernández Fueyo, Elena; Ruiz Dueñas, Francisco J.; Ferreira, Patricia; Floudas, Dimitrio; Lavín Trueba, José Luis Upna; Oguiza Tomé, José Antonio Upna; Pérez Garrido, Gumersinda Upna; Pisabarro de Lucas, Gerardo Upna; Ramírez Nasto, Lucía Upna; Santoyo Santos, Francisco Upna (National Academy of Sciences, 2012)   Artículo / Artikulua  OpenAccess
      Efficient lignin depolymerization is unique to the wood decay basidiomycetes, collectively referred to as white rot fungi. Phanerochaete chrysosporium simultaneously degrades lignin and cellulose, whereas the closely related ...
    • Comparative genomics of Coniophora olivacea reveals different patterns of genome expansion in Boletales 

      Castanera Andrés, Raúl Upna; Pérez Garrido, Gumersinda Upna; López Varas, Leticia; Amselem, Joëlle; LaButti, Kurt; Singan, Vasanth; Lipzen, Anna; Haridas, Sajeet; Barry, Kerrie; Grigoriev, Igor V.; Pisabarro de Lucas, Gerardo Upna; Ramírez Nasto, Lucía Upna (BioMed Central, 2017)   Artículo / Artikulua  OpenAccess
      Background: Coniophora olivacea is a basidiomycete fungus belonging to the order Boletales that produces brown-rot decay on dead wood of conifers. The Boletales order comprises a diverse group of species including saprotrophs ...
    • Genetic linkage map of the edible basidiomycete Pleurotus ostreatus 

      Larraya Reta, Luis María Upna; Pérez Garrido, Gumersinda Upna; Ritter, Enrique; Pisabarro de Lucas, Gerardo Upna; Ramírez Nasto, Lucía Upna (American Society for Microbiology, 2000)   Artículo / Artikulua  OpenAccess
      We have constructed a genetic linkage map of the edible basidiomycete Pleurotus ostreatus (var. Florida). The map is based on the segregation of 178 random amplified polymorphic DNA and 23 restriction fragment length polymorphism ...
    • Genomics and transcriptomics characterization of genes expressed during postharvest at 4 degrees C by the edible basidiomycete Pleurotus ostreatus 

      Ramírez Nasto, Lucía Upna; Oguiza Tomé, José Antonio Upna; Pérez Garrido, Gumersinda Upna; Lavín Trueba, José Luis Upna; Omarini, Alejandra; Santoyo Santos, Francisco Upna; Alfaro Sánchez, Manuel Upna; Castanera Andrés, Raúl Upna; Parenti, Alejandra Upna; Muguerza Domínguez, Elaia Upna; Pisabarro de Lucas, Gerardo Upna (Viguera Editores, S. L., 2011)   Artículo / Artikulua  OpenAccess
      Pleurotus ostreatus is an industrially cultivated basidiomycete with nutritional and environmental applications. Its genome, which was sequenced by the joint Genome Institute, has become a model for lignin degradation ...
    • Highly expressed captured genes and cross-kingdom domains present in Helitrons create novel diversity in Pleurotus ostreatus and other fungi 

      Castanera Andrés, Raúl Upna; Pérez Garrido, Gumersinda Upna; López Varas, Leticia Upna; Sancho, Rubén; Santoyo Santos, Francisco Upna; Alfaro Sánchez, Manuel Upna; Gabaldón Estevan, Juan Antonio; Pisabarro de Lucas, Gerardo Upna; Oguiza Tomé, José Antonio Upna; Ramírez Nasto, Lucía Upna (BioMed Central, 2014)   Artículo / Artikulua  OpenAccess
      Background: Helitrons are class-II eukaryotic transposons that transpose via a rolling circle mechanism. Due to their ability to capture and mobilize gene fragments, they play an important role in the evolution of their ...
    • Non-additive transcriptional profiles underlie dikaryotic superiority in Pleurotus ostreatus laccase activity 

      Castanera Andrés, Raúl Upna; Omarini, Alejandra; Santoyo Santos, Francisco Upna; Pérez Garrido, Gumersinda Upna; Pisabarro de Lucas, Gerardo Upna; Ramírez Nasto, Lucía Upna (Public Library of Science, 2013)   Artículo / Artikulua  OpenAccess
      Background: The basidiomycete Pleurotus ostreatus is an efficient producer of laccases, a group of enzymes appreciated for their use in multiple industrial processes. The aim of this study was to reveal the molecular basis ...
    • Relationship between monokaryotic growth rate and mating type in the edible basidiomycete Pleurotus ostreatus 

      Larraya Reta, Luis María Upna; Pérez Garrido, Gumersinda Upna; Iribarren, Iñaki; Blanco Vaca, Juan Antonio Upna; Alfonso Esquíroz, Mikel; Pisabarro de Lucas, Gerardo Upna; Ramírez Nasto, Lucía Upna (American Society for Microbiology, 2001)   Artículo / Artikulua  OpenAccess
      The edible fungus Pleurotus ostreatus (oyster mushroom) is an industrially produced heterothallic homobasidiomycete whose mating is controlled by a bifactorial tetrapolar genetic system. Two mating loci (matA and matB) ...
    • Telomere organization in the ligninolytic basidiomycete Pleurotus ostreatus 

      Pérez Garrido, Gumersinda Upna; Pangilinan, Jasmyn; Pisabarro de Lucas, Gerardo Upna; Ramírez Nasto, Lucía Upna (American Society for Microbiology, 2008)   Artículo / Artikulua  OpenAccess
      Telomeres are structural and functional chromosome regions that are essential for the cell cycle to proceed normally. They are, however, difficult to map genetically and to identify in genome-wide sequence programs because ...
    • Transcriptional and enzymatic profiling of Pleurotus ostreatus laccase genes in submerged and solid-state fermentation cultures 

      Castanera Andrés, Raúl Upna; Pérez Garrido, Gumersinda Upna; Omarini, Alejandra; Alfaro Sánchez, Manuel Upna; Pisabarro de Lucas, Gerardo Upna; Faraco, Vicenza; Amore, Antonella; Ramírez Nasto, Lucía Upna (American Society for Microbiology, 2012)   Artículo / Artikulua  OpenAccess
      The genome of the white rot basidiomycete Pleurotus ostreatus includes 12 phenol oxidase (laccase) genes. In this study, we examined their expression profiles in different fungal strains under different culture conditions ...
    • Transposable elements versus the fungal genome: impact on whole-genome architecture and transcriptional profiles 

      Castanera Andrés, Raúl Upna; López Varas, Leticia Upna; Borgognone, Alessandra Upna; LaButti, Kurt; Lapidus, Alla; Schmutz, Jeremy; Grimwood, Jane; Pérez Garrido, Gumersinda Upna; Pisabarro de Lucas, Gerardo Upna; Grigoriev, Igor V.; Stajich, Jason E.; Ramírez Nasto, Lucía Upna (Public Library of Science, 2016)   Artículo / Artikulua  OpenAccess
      Transposable elements (TEs) are exceptional contributors to eukaryotic genome diversity. Their ubiquitous presence impacts the genomes of nearly all species and mediates genome evolution by causing mutations and chromosomal ...