• Advanced studies of yeast metabolism under winemaking conditions. Paving the way for a predictive model 

      Martínez Moreno, Rubén (2014)   Tesis doctoral / Doktoretza tesia  OpenAccess
      En esta tesis doctoral se presenta una nueva metodología para el estudio de la fisiología y del metabolismo de Saccharomyces cerevisiae durante la fermentación alcohólica que tienen lugar en el proceso de vinificación. ...
    • Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis 

      Fernández Fueyo, Elena; Ruiz Dueñas, Francisco J.; Ferreira, Patricia; Floudas, Dimitrio; Lavín Trueba, José Luis Upna; Oguiza Tomé, José Antonio Upna; Pérez Garrido, Gumersinda Upna; Pisabarro de Lucas, Gerardo Upna; Ramírez Nasto, Lucía Upna; Santoyo Santos, Francisco Upna (National Academy of Sciences, 2012)   Artículo / Artikulua  OpenAccess
      Efficient lignin depolymerization is unique to the wood decay basidiomycetes, collectively referred to as white rot fungi. Phanerochaete chrysosporium simultaneously degrades lignin and cellulose, whereas the closely related ...
    • Comparative genomics of Coniophora olivacea reveals different patterns of genome expansion in Boletales 

      Castanera Andrés, Raúl Upna; Pérez Garrido, Gumersinda Upna; López Varas, Leticia; Amselem, Joëlle; LaButti, Kurt; Singan, Vasanth; Lipzen, Anna; Haridas, Sajeet; Barry, Kerrie; Grigoriev, Igor V.; Pisabarro de Lucas, Gerardo Upna; Ramírez Nasto, Lucía Upna (BioMed Central, 2017)   Artículo / Artikulua  OpenAccess
      Background: Coniophora olivacea is a basidiomycete fungus belonging to the order Boletales that produces brown-rot decay on dead wood of conifers. The Boletales order comprises a diverse group of species including saprotrophs ...
    • Computational prediction of protein-coding gene and annotation of DNA sequences with agronomic interest in Pleurotus ostreatus (Oyster Mushroom) 

      Palma Dovis, Leopoldo Upna; Peñas Parrila, María Manuela; Ramírez Nasto, Lucía Upna; Pisabarro de Lucas, Gerardo Upna (Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa, 2006)   Contribución a congreso / Biltzarrerako ekarpena  OpenAccess
      Pleurotus ostreatus, commonly known as oyster mushroom, is a commercially important edible fungus with interesting biotechnological properties. Quantitative trait loci (QTL) analyses are rare in fungi and little is known ...
    • Diffusional properties of methanogenic granular sludge: 1H NMR characterization 

      Lens, Piet N. L.; Gastesi Barasoain, Rakel Upna; Vergeldt, Frank; Aelst, Adriaan C. van; Pisabarro de Lucas, Gerardo Upna; As, Henk van (American Society for Microbiology, 2003)   Artículo / Artikulua  OpenAccess
      The diffusive properties of anaerobic methanogenic and sulfidogenic aggregates present in wastewater treatment bioreactors were studied using diffusion analysis by relaxation time-separated pulsed-field gradient nuclear ...
    • Enzymatic characterization of a monokaryon population of the edible mushroom, Pleurotus ostreatus with a view to genetic improvement 

      Terrón, María del Carmen; López, María; Carbajo, José M.; Pisabarro de Lucas, Gerardo Upna; Ramírez Nasto, Lucía Upna; González Aldo, E. (Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa, 2006)   Contribución a congreso / Biltzarrerako ekarpena  OpenAccess
      In this work the lignocellulolytic enzymes produced by the edible mushroom Pleurotus ostreatus var. florida were studied. The objective was to know their relationship with the degradation of the biopolymers present in the ...
    • Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white-rot/brown-rot paradigm for wood decay fungi 

      Riley, Robert; Salamov, Asaf A.; Brown, Daren W.; Nagy, Laszlo G.; Floudas, Dimitrios; Held, Benjamin W.; Levasseur, Anthony; Lombard, Vincent; Morin, Emmanuelle; Pisabarro de Lucas, Gerardo Upna (National Academy of Sciences, 2014)   Artículo / Artikulua  OpenAccess
      Basidiomycota (basidiomycetes) make up 32% of the described fungi and include most wood-decaying species, as well as pathogens and mutualistic symbionts. Wood-decaying basidiomycetes have typically been classified as either ...
    • Genetic breeding of edible mushrooms: from the genome to the production of new varieties of Pleurotus ostreatus 

      Pisabarro de Lucas, Gerardo Upna; Peñas Parrila, María Manuela; Pérez Garrido, Gumersinda Upna; Park, Sang-Kyu; Eizmendi Goicoechea, Arantza; Parada Albarracín, Julián Andrés; Palma Dovis, Leopoldo Upna; Idareta Olagüe, Eneko Upna; Jurado Cabanillas, Javier; Castellón Gadea, Jordi; Ramírez Nasto, Lucía Upna (Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa, 2006)   Contribución a congreso / Biltzarrerako ekarpena  OpenAccess
      The breeding of new varieties of industrially cultivated edible mushrooms must proceed in the framework defined by the breeding objectives, the biological characteristics of the material and the legal and cultural ...
    • Genetic linkage map of the edible basidiomycete Pleurotus ostreatus 

      Larraya Reta, Luis María Upna; Pérez Garrido, Gumersinda Upna; Ritter, Enrique; Pisabarro de Lucas, Gerardo Upna; Ramírez Nasto, Lucía Upna (American Society for Microbiology, 2000)   Artículo / Artikulua  OpenAccess
      We have constructed a genetic linkage map of the edible basidiomycete Pleurotus ostreatus (var. Florida). The map is based on the segregation of 178 random amplified polymorphic DNA and 23 restriction fragment length polymorphism ...
    • Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion 

      Martínez, Diego; Challacombe, Jean; Morgenstern, Ingo; Hibbett, David; Schmoll, Monika; Kubicek, Christian P.; Ferreira, Patricia; Pisabarro de Lucas, Gerardo Upna; Lavín Trueba, José Luis Upna; Oguiza Tomé, José Antonio Upna (National Academy of Sciences, 2009)   Artículo / Artikulua  OpenAccess
      Brown-rot fungi such as Postia placenta are common inhabitants of forest ecosystems and are also largely responsible for the destructive decay of wooden structures. Rapid depolymerization of cellulose is a distinguishing ...
    • Genomic, transcriptomic and proteomic analysis of Pleurotus ostreatus secreted proteins 

      Alfaro Sánchez, Manuel Upna (2017)   Tesis doctoral / Doktoretza tesia  OpenAccess
      The objective of this thesis is to study the proteins secreted by the edible and worldwide cultivated white rot basidiomycete fungus Pleurotus ostreatus with three major goals: to determine the set of proteins secreted ...
    • Genomics and transcriptomics characterization of genes expressed during postharvest at 4 degrees C by the edible basidiomycete Pleurotus ostreatus 

      Ramírez Nasto, Lucía Upna; Oguiza Tomé, José Antonio Upna; Pérez Garrido, Gumersinda Upna; Lavín Trueba, José Luis Upna; Omarini, Alejandra; Santoyo Santos, Francisco Upna; Alfaro Sánchez, Manuel Upna; Castanera Andrés, Raúl Upna; Parenti, Alejandra Upna; Muguerza Domínguez, Elaia Upna; Pisabarro de Lucas, Gerardo Upna (Viguera Editores, S. L., 2011)   Artículo / Artikulua  OpenAccess
      Pleurotus ostreatus is an industrially cultivated basidiomycete with nutritional and environmental applications. Its genome, which was sequenced by the joint Genome Institute, has become a model for lignin degradation ...
    • Highly expressed captured genes and cross-kingdom domains present in Helitrons create novel diversity in Pleurotus ostreatus and other fungi 

      Castanera Andrés, Raúl Upna; Pérez Garrido, Gumersinda Upna; López Varas, Leticia Upna; Sancho, Rubén; Santoyo Santos, Francisco Upna; Alfaro Sánchez, Manuel Upna; Gabaldón Estevan, Juan Antonio; Pisabarro de Lucas, Gerardo Upna; Oguiza Tomé, José Antonio Upna; Ramírez Nasto, Lucía Upna (BioMed Central, 2014)   Artículo / Artikulua  OpenAccess
      Background: Helitrons are class-II eukaryotic transposons that transpose via a rolling circle mechanism. Due to their ability to capture and mobilize gene fragments, they play an important role in the evolution of their ...
    • Identification and functional characterisation of ctr1, a Pleurotus ostreatus gene coding for a copper transporter 

      Peñas Parrila, María Manuela; Azparren Larraya, María Goretti; Domínguez, A.; Sommer, H.; Ramírez Nasto, Lucía Upna; Pisabarro de Lucas, Gerardo Upna (Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa, 2006)   Contribución a congreso / Biltzarrerako ekarpena  OpenAccess
      Copper homeostasis is primordial for life maintenance and especially relevant for ligning-degrading fungi whose phenol-oxidase enzymes depend on this micronutrient for their activity. In this paper we report the identification of ...
    • Isolation, molecular characterization and location of telomeric sequences of the basidiomycete Pleurotus ostreatus var. florida 

      Pérez Garrido, Gumersinda Upna; Pisabarro de Lucas, Gerardo Upna; Ramírez Nasto, Lucía Upna (Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa, 2006)   Contribución a congreso / Biltzarrerako ekarpena  OpenAccess
      The white rot fungus Pleurotus ostreatus is an edible basidiomycete of increasing biotechnological interest due to its ability to degrade both wood and chemicals related to lignin degradation products. Telomeres are ...
    • Mapping of genomic regions (quantitative trait loci) controlling production and quality in industrial cultures of the edible basidiomycete Pleurotus ostreatus 

      Larraya Reta, Luis María Upna; Alfonso Esquíroz, Mikel; Pisabarro de Lucas, Gerardo Upna; Ramírez Nasto, Lucía Upna (American Society for Microbiology, 2003)   Artículo / Artikulua  OpenAccess
      Industrial production of the edible basidiomycete Pleurotus ostreatus (oyster mushroom) is based on a solid fermentation process in which a limited number of selected strains are used. Optimization of industrial mushroom ...
    • Mapping the Pleurotus ostreatus genome 

      Castellón Gadea, Jordi; Pisabarro de Lucas, Gerardo Upna; Ramírez Nasto, Lucía Upna (Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa, 2006)   Contribución a congreso / Biltzarrerako ekarpena  OpenAccess
      Pleurotus ostreatus is a commercially important edible mushroom commonly known as oyster mushroom which has also important biotechnical applications. Industrial production of P.ostreatus is based on a solid fermentation process ...
    • Molecular characterization of A cellobiohydrolase gene family in the fungus Pleurotus ostreatus 

      Eizmendi Goicoechea, Arantza; Sannia, G.; Ramírez Nasto, Lucía Upna; Pisabarro de Lucas, Gerardo Upna (Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa, 2006)   Contribución a congreso / Biltzarrerako ekarpena  OpenAccess
      Cellulose is the most abundant biological polymer on Earth. Its chemical composition consists of D-glucose units linked by β-1,4- glycosidic bonds forming linear polymeric chains with a reducing and a non-reducing ...
    • Non-additive transcriptional profiles underlie dikaryotic superiority in Pleurotus ostreatus laccase activity 

      Castanera Andrés, Raúl Upna; Omarini, Alejandra; Santoyo Santos, Francisco Upna; Pérez Garrido, Gumersinda Upna; Pisabarro de Lucas, Gerardo Upna; Ramírez Nasto, Lucía Upna (Public Library of Science, 2013)   Artículo / Artikulua  OpenAccess
      Background: The basidiomycete Pleurotus ostreatus is an efficient producer of laccases, a group of enzymes appreciated for their use in multiple industrial processes. The aim of this study was to reveal the molecular basis ...
    • Nutritional value of protein from vegetative mycelia of edible mushroom Pleurotus ostreatus 

      Parada Albarracín, Julián Andrés; Urdaneta, Elena; Marzo Pérez, Florencio Upna; Ramírez Nasto, Lucía Upna; Pisabarro de Lucas, Gerardo Upna (Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa, 2006)   Contribución a congreso / Biltzarrerako ekarpena  OpenAccess
      The present work was designed to study the effects of supplementation a control diet with P. ostreatus mycelium for evaluation a nutritional value of mycoprotein and possible cholesterol lowering.