Listar Artículos de revista DPA - NES Aldizkari artikuluak por autor UPNA "Castanera Andrés, Raúl"

Mostrando ítems 1-11 de 11

    • Comparative and transcriptional analysis of the predicted secretome in the lignocellulose-degrading basidiomycete fungus Pleurotus ostreatus 

      Alfaro Sánchez, Manuel Upna Orcid; Castanera Andrés, Raúl Upna Orcid; Lavín Trueba, José Luis Upna; Oguiza Tomé, José Antonio Upna Orcid; Ramírez Nasto, Lucía Upna Orcid; Pisabarro de Lucas, Gerardo Upna Orcid (WileySociety for Applied Microbiology, 2016)   Artículo / Artikulua  OpenAccess
      Fungi interact with their environment by secreting proteins to obtain nutrients, elicit responses and modify their surroundings. Because the set of proteins secreted by a fungus is related to its lifestyle, it should be ...

    • Comparative genomics of Coniophora olivacea reveals different patterns of genome expansion in Boletales 

      Castanera Andrés, Raúl Upna Orcid; Pérez Garrido, María Gumersinda Upna Orcid; López Varas, Leticia Upna; Amselem, Joëlle; LaButti, Kurt; Singan, Vasanth; Lipzen, Anna; Haridas, Sajeet; Barry, Kerrie; Grigoriev, Igor V.; Pisabarro de Lucas, Gerardo Upna Orcid; Ramírez Nasto, Lucía Upna Orcid (BioMed Central, 2017)   Artículo / Artikulua  OpenAccess
      Background: Coniophora olivacea is a basidiomycete fungus belonging to the order Boletales that produces brown-rot decay on dead wood of conifers. The Boletales order comprises a diverse group of species including saprotrophs ...

    • Genomics and transcriptomics characterization of genes expressed during postharvest at 4 degrees C by the edible basidiomycete Pleurotus ostreatus 

      Ramírez Nasto, Lucía Upna Orcid; Oguiza Tomé, José Antonio Upna Orcid; Pérez Garrido, María Gumersinda Upna Orcid; Lavín Trueba, José Luis Upna; Omarini, Alejandra; Santoyo Santos, Francisco Upna; Alfaro Sánchez, Manuel Upna Orcid; Castanera Andrés, Raúl Upna Orcid; Parenti, Alejandra Upna; Muguerza Domínguez, Elaia Upna; Pisabarro de Lucas, Gerardo Upna Orcid (Viguera Editores, S. L., 2011)   Artículo / Artikulua  OpenAccess
      Pleurotus ostreatus is an industrially cultivated basidiomycete with nutritional and environmental applications. Its genome, which was sequenced by the joint Genome Institute, has become a model for lignin degradation ...

    • Highly expressed captured genes and cross-kingdom domains present in Helitrons create novel diversity in Pleurotus ostreatus and other fungi 

      Castanera Andrés, Raúl Upna Orcid; Pérez Garrido, María Gumersinda Upna Orcid; López Varas, Leticia Upna; Sancho, Rubén; Santoyo Santos, Francisco Upna; Alfaro Sánchez, Manuel Upna Orcid; Gabaldón Estevan, Juan Antonio; Pisabarro de Lucas, Gerardo Upna Orcid; Oguiza Tomé, José Antonio Upna Orcid; Ramírez Nasto, Lucía Upna Orcid (BioMed Central, 2014)   Artículo / Artikulua  OpenAccess
      Background: Helitrons are class-II eukaryotic transposons that transpose via a rolling circle mechanism. Due to their ability to capture and mobilize gene fragments, they play an important role in the evolution of their ...

    • Ligninolytic peroxidase gene expression by Pleurotus ostreatus: differential regulation in lignocellulose medium and effect of temperature and pH 

      Fernández Fueyo, Elena; Castanera Andrés, Raúl Upna Orcid; Ruiz Dueñas, Francisco J.; Ramírez Nasto, Lucía Upna Orcid; Pisabarro de Lucas, Gerardo Upna Orcid (Elsevier, 2014)   Artículo / Artikulua  OpenAccess
      Pleurotus ostreatus is an important edible mushroom and a model lignin degrading organism, whose genome contains nine genes of ligninolytic peroxidases, characteristic of white-rot fungi. These genes encode six manganese ...

    • Non-additive transcriptional profiles underlie dikaryotic superiority in Pleurotus ostreatus laccase activity 

      Castanera Andrés, Raúl Upna Orcid; Omarini, Alejandra; Santoyo Santos, Francisco Upna; Pérez Garrido, María Gumersinda Upna Orcid; Pisabarro de Lucas, Gerardo Upna Orcid; Ramírez Nasto, Lucía Upna Orcid (Public Library of Science, 2013)   Artículo / Artikulua  OpenAccess
      Background: The basidiomycete Pleurotus ostreatus is an efficient producer of laccases, a group of enzymes appreciated for their use in multiple industrial processes. The aim of this study was to reveal the molecular basis ...

    • Somatic transposition and meiotically driven elimination of an active helitron family in Pleurotus ostreatus 

      Borgognone, Alessandra Upna Orcid; Castanera Andrés, Raúl Upna Orcid; Muguerza Domínguez, Elaia Upna; Pisabarro de Lucas, Gerardo Upna Orcid; Ramírez Nasto, Lucía Upna Orcid (Oxford University Press, 2017)   Artículo / Artikulua  OpenAccess
      Helitrons constitute a superfamily of DNA transposons that were discovered in silico and are widespread in most eukaryotic genomes. They are postulated to mobilize through a “rollingcircle” mechanism, but the experimental ...

    • Transcriptional and enzymatic profiling of Pleurotus ostreatus laccase genes in submerged and solid-state fermentation cultures 

      Castanera Andrés, Raúl Upna Orcid; Pérez Garrido, María Gumersinda Upna Orcid; Omarini, Alejandra; Alfaro Sánchez, Manuel Upna Orcid; Pisabarro de Lucas, Gerardo Upna Orcid; Faraco, Vicenza; Amore, Antonella; Ramírez Nasto, Lucía Upna Orcid (American Society for Microbiology, 2012)   Artículo / Artikulua  OpenAccess
      The genome of the white rot basidiomycete Pleurotus ostreatus includes 12 phenol oxidase (laccase) genes. In this study, we examined their expression profiles in different fungal strains under different culture conditions ...

    • Transposable elements versus the fungal genome: impact on whole-genome architecture and transcriptional profiles 

      Castanera Andrés, Raúl Upna Orcid; López Varas, Leticia Upna; Borgognone, Alessandra Upna Orcid; LaButti, Kurt; Lapidus, Alla; Schmutz, Jeremy; Grimwood, Jane; Pérez Garrido, María Gumersinda Upna Orcid; Pisabarro de Lucas, Gerardo Upna Orcid; Grigoriev, Igor V.; Stajich, Jason E.; Ramírez Nasto, Lucía Upna Orcid (Public Library of Science, 2016)   Artículo / Artikulua  OpenAccess
      Transposable elements (TEs) are exceptional contributors to eukaryotic genome diversity. Their ubiquitous presence impacts the genomes of nearly all species and mediates genome evolution by causing mutations and chromosomal ...

    • Transposon-associated epigenetic silencing during Pleurotus ostreatus life cycle 

      Borgognone, Alessandra Upna Orcid; Castanera Andrés, Raúl Upna Orcid; Morselli, Marco; López Varas, Leticia Upna; Rubbi, Liudmilla; Pisabarro de Lucas, Gerardo Upna Orcid; Pellegrini, Matteo; Ramírez Nasto, Lucía Upna Orcid (Oxford University Press, 2018)   Artículo / Artikulua  OpenAccess
      Transposable elements constitute an important fraction of eukaryotic genomes. Given their mutagenic potential, host-genomes have evolved epigenetic defense mechanisms to limit their expansion. In fungi, epigenetic modifications ...

    • Validation of reference genes for transcriptional analyses in Pleurotus ostreatus by using reverse transcription-quantitative PCR 

      Castanera Andrés, Raúl Upna Orcid; López Varas, Leticia Upna; Pisabarro de Lucas, Gerardo Upna Orcid; Ramírez Nasto, Lucía Upna Orcid (American Society for Microbiology, 2015)   Artículo / Artikulua  OpenAccess
      Recently, the lignin-degrading basidiomycete Pleurotus ostreatus has become a widely used model organism for fungal genomic and transcriptomic analyses. The increasing interest in this species has led to an increasing ...
      El Repositorio ha recibido la ayuda de la Fundación Española para la Ciencia y la Tecnología para la realización de actividades en el ámbito del fomento de la investigación científica de excelencia, en la Línea 2. Repositorios institucionales (convocatoria 2020-2021).
      Logo MinisterioLogo Fecyt

      Contacto | Sugerencias