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dc.creatorNavarro, J. Danieles_ES
dc.creatorTalreja, Naveenes_ES
dc.creatorPeri, Surajes_ES
dc.creatorVrushabendra, B. M.es_ES
dc.creatorRashmi, B. P.es_ES
dc.creatorPadma, N.es_ES
dc.creatorSurendranath, Vineethes_ES
dc.creatorJonnalagadda, Chandra Kiranes_ES
dc.creatorKousthub, P. S.es_ES
dc.creatorDeshpande, Nandanes_ES
dc.creatorShanker, K.es_ES
dc.creatorPandey, Akhileshes_ES
dc.date.accessioned2014-05-28T09:28:09Z
dc.date.available2014-05-28T09:28:09Z
dc.date.issued2004
dc.identifier.issn1471-2105
dc.identifier.other886
dc.identifier.urihttps://hdl.handle.net/2454/10624
dc.descriptionUPNa. Departamento de Automática y Computación. Área de Ciencias de la Computación e Inteligencia Artificial.es_ES
dc.description.abstractBackground: The explosion in biological information creates the need for databases that are easy to develop, easy to maintain and can be easily manipulated by annotators who are most likely to be biologists. However, deployment of scalable and extensible databases is not an easy task and generally requires substantial expertise in database development. Results: BioBuilder is a Zope-based software tool that was developed to facilitate intuitive creation of protein databases. Protein data can be entered and annotated through web forms along with the flexibility to add customized annotation features to protein entries. A built-in review system permits a global team of scientists to coordinate their annotation efforts. We have already used BioBuilder to develop Human Protein Reference Database http://www.hprd.org, a comprehensive annotated repository of the human proteome. The data can be exported in the extensible markup language (XML) format, which is rapidly becoming as the standard format for data exchange. Conclusions: As the proteomic data for several organisms begins to accumulate, BioBuilder will prove to be an invaluable platform for functional annotation and development of customizable protein centric databases. BioBuilder is open source and is available under the terms of LGPLen
dc.format.mimetypeapplication/pdfen
dc.language.isoengen
dc.publisherBioMed Centralen
dc.relation.ispartofBMC Bioinformatics, 2004, 5: 43en
dc.rights© 2004 Navarro et al; licensee BioMed Central Ltd. This is an Open Access article: verbatim copying and redistribution of this article are permitted in all media for any purpose, provided this notice is preserved along with the article's original URL. Creative Commons Attribution 4.0 International (CC BY 4.0)en
dc.rights.urihttp://creativecommons.org/licenses/by/4.0/
dc.subjectBioBuilderen
dc.subjectProtein databasesen
dc.titleBioBuilder as a database development and functional annotation platform for proteinsen
dc.typeArtículo / Artikuluaes
dc.typeinfo:eu-repo/semantics/articleen
dc.contributor.affiliationNafarroako Unibertsitate Publikoa. Automatika eta Konputazioa Sailaeu
dc.contributor.affiliationUniversidad Pública de Navarra. Departamento de Automática y Computaciónes_ES
dc.rights.accessRightsAcceso abierto / Sarbide irekiaes
dc.rights.accessRightsinfo:eu-repo/semantics/openAccessen
dc.identifier.doi10.1186/1471-2105-5-43
dc.relation.publisherversionhttps://dx.doi.org/10.1186/1471-2105-5-43
dc.type.versionVersión publicada / Argitaratu den bertsioaes
dc.type.versioninfo:eu-repo/semantics/publishedVersionen


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© 2004 Navarro et al; licensee BioMed Central Ltd. This is an Open Access article: verbatim copying and redistribution of this article are permitted in all media for any purpose, provided this notice is preserved along with the article's original URL. Creative Commons Attribution 4.0 International (CC BY 4.0)
Except where otherwise noted, this item's license is described as © 2004 Navarro et al; licensee BioMed Central Ltd. This is an Open Access article: verbatim copying and redistribution of this article are permitted in all media for any purpose, provided this notice is preserved along with the article's original URL. Creative Commons Attribution 4.0 International (CC BY 4.0)