Soba Hidalgo, David
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Soba Hidalgo
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David
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Ciencias
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IMAB. Research Institute for Multidisciplinary Applied Biology
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Publication Open Access Estimating peanut and soybean photosynthetic traits using leaf spectral reflectance and advance regression models(Springer, 2022) Buchaillot, María Luisa; Soba Hidalgo, David; Shu, Tianchu; Liu, Juan; Aranjuelo Michelena, Iker; Araus, José Luis; Runion, G. Brett; Prior, Stephen A.; Kefauver, Shawn C.; Sanz Sáez, Álvaro; IdAB. Instituto de Agrobiotecnología / Agrobioteknologiako InstitutuaOne proposed key strategy for increasing potential crop stability and yield centers on exploitation of genotypic variability in photosynthetic capacity through precise high-throughput phenotyping techniques. Photosynthetic parameters, such as the maximum rate of Rubisco catalyzed carboxylation (Vc,max) and maximum electron transport rate supporting RuBP regeneration (Jmax), have been identified as key targets for improvement. The primary techniques for measuring these physiological parameters are very time-consuming. However, these parameters could be estimated using rapid and non-destructive leaf spectroscopy techniques. This study compared four different advanced regression models (PLS, BR, ARDR, and LASSO) to estimate Vc,max and Jmax based on leaf reflectance spectra measured with an ASD FieldSpec4. Two leguminous species were tested under different controlled environmental conditions: (1) peanut under different water regimes at normal atmospheric conditions and (2) soybean under high [CO2] and high night temperature. Model sensitivities were assessed for each crop and treatment separately and in combination to identify strengths and weaknesses of each modeling approach. Regardless of regression model, robust predictions were achieved for Vc,max (R2 = 0.70) and Jmax (R2 = 0.50). Field spectroscopy shows promising results for estimating spatial and temporal variations in photosynthetic capacity based on leaf and canopy spectral properties.Publication Open Access Soybean inoculated with one bradyrhizobium strain isolated at elevated [CO2] show an impaired C and N metabolism when grown at ambient [CO2](Frontiers Media, 2021) Soba Hidalgo, David; Aranjuelo Michelena, Iker; Gakière, Bertrand; Gilard, Françoise; Pérez López, Usue; Mena Petite, Amaia; Muñoz Rueda, Alberto; Lacuesta, Maite; Sanz Sáez, Álvaro; Ciencias; ZientziakSoybean (Glycine max L.) future response to elevated [CO2] has been shown to differ when inoculated with B. japonicum strains isolated at ambient or elevated [CO2]. Plants, inoculated with three Bradyrhizobium strains isolated at different [CO2], were grown in chambers at current and elevated [CO2] (400 vs. 700 ppm). Together with nodule and leaf metabolomic profile, characterization of nodule N-fixation and exchange between organs were tested through 15N2-labeling analysis. Soybeans inoculated with SFJ14-36 strain (isolated at elevated [CO2]) showed a strong metabolic imbalance, at nodule and leaf levels when grown at ambient [CO2], probably due to an insufficient supply of N by nodules, as shown by 15N2-labeling. In nodules, due to shortage of photoassimilate, C may be diverted to aspartic acid instead of malate in order to improve the efficiency of the C source sustaining N2-fixation. In leaves, photorespiration and respiration were boosted at ambient [CO2] in plants inoculated with this strain. Additionally, free phytol, antioxidants, and fatty acid content could be indicate induced senescence due to oxidative stress and lack of nitrogen. Therefore, plants inoculated with Bradyrhizobium strain isolated at elevated [CO2] may have lost their capacity to form effective symbiosis at ambient [CO2] and that was translated at whole plant level through metabolic impairment.