Open Access
Lossy mode resonance based microfluidic platform developed on planar waveguide for biosensing applications
(MDPI, 2022) Benítez Pérez, Melanys; Zubiate Orzanco, Pablo; Del Villar, Ignacio; Socorro Leránoz, Abián Bentor; Matías Maestro, Ignacio; Ingeniaritza Elektrikoa, Elektronikoaren eta Telekomunikazio Ingeniaritzaren; Institute of Smart Cities - ISC; Ingeniería Eléctrica, Electrónica y de Comunicación; Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa
The development of resonance phenomena-based optical biosensors has gained relevance in recent years due to the excellent optical fiber properties and progress in the research on materials and techniques that allow resonance generation. However, for lossy mode resonance (LMR)-based sensors, the optical fiber presents disadvantages, such as the need for splicing the sensor head and the complex polarization control. To avoid these issues, planar waveguides such as coverslips are easier to handle, cost-effective, and more robust structures. In this work, a microfluidic LMR-based planar waveguide platform was proposed, and its use for biosensing applications was evaluated by detecting anti-immunoglobulin G (anti-IgG). In order to generate the wavelength resonance, the sensor surface was coated with a titanium dioxide (TiO2) thin-film. IgG antibodies were immobilized by covalent binding, and the detection assay was carried out by injecting anti-IgG in PBS buffer solutions from 5 to 20 μg/mL. The LMR wavelength shifted to higher values when increasing the analyte concentration, which means that the proposed system was able to detect the IgG/anti-IgG binding. The calibration curve was built from the experimental data obtained in three repetitions of the assay. In this way, a prototype of an LMR-based biosensing microfluidic platform developed on planar substrates was obtained for the first time
Open Access
Thin film coated D-shaped fiber regenerable biosensor
(Optica, 2020) Santano Rivero, Desiree; Ciáurriz Gortari, Paula; Tellechea Malda, Edurne; Zubiate Orzanco, Pablo; Socorro Leránoz, Abián Bentor; Del Villar, Ignacio; Matías Maestro, Ignacio; Arregui San Martín, Francisco Javier; Ingeniería Eléctrica, Electrónica y de Comunicación; Ingeniaritza Elektrikoa, Elektronikoa eta Telekomunikazio Ingeniaritza; Institute of Smart Cities - ISC
We present a novel covalent functionalization of a D-shape fiber biosensor based on Lossy Mode Resonances. IgG/anti-IgG model is applied to prove the regeneration of the union and thus the re-usability of the sensor.
Open Access
Lossy mode resonance enabling ultra-low detection limit for fibre-optic biosensors (INVITED)
(Springer, 2020) Chiavaioli, Francesco; Giannetti, Ambra; Tombelli, Sara; Trono, Cosimo; Del Villar, Ignacio; Matías Maestro, Ignacio; Zubiate Orzanco, Pablo; Ruiz Zamarreño, Carlos; Arregui San Martín, Francisco Javier; Baldini, Francesco; Ingeniaritza Elektrikoa, Elektronikoaren eta Telekomunikazio Ingeniaritzaren; Institute of Smart Cities - ISC; Ingeniería Eléctrica, Electrónica y de Comunicación; Gobierno de Navarra / Nafarroako Gobernua, 72/2015
The combination of optical fibre-based biosensors with nanotechnologies is providing the opportunity for the development of in situ, portable, lightweight, versatile and high-sensitivity optical sensing platforms. We report on the generation of lossy mode resonances (LMRs) by means of the deposition of nm-thick SnO2 film on optical fibres. This allows measuring precisely and accurately the changes in refractive index of the fibre-surrounding medium with very high sensitivity compared to other optical technology platforms, such as long period grating or surface plasmon resonance. This approach, mixed with the use of specialty fiber structures such as Dshaped fibres, allows improving the light-matter interaction in strong way. Different imaging systems, i.e. SEM and TEM along with X-EDS tool, have been used to study the optical features of the fiber coating. The shift of the LMR has been monitored in real-time thanks to conventional wavelength interrogation system and ad hoc developed microfluidics. A big leap in performance has been attained by detecting femtomolar concentrations in human serum. The biosensor reusability has been also tested by using a solution of sodium dodecyl sulphate.
Open Access
D-shape optical fiber refractometer based on TM and TE lossy mode resonances
(SPIE, 2014) Zubiate Orzanco, Pablo; Ruiz Zamarreño, Carlos; Del Villar, Ignacio; Matías Maestro, Ignacio; Arregui San Martín, Francisco Javier; Ingeniería Eléctrica, Electrónica y de Comunicación; Ingeniaritza Elektrikoa, Elektronikoa eta Telekomunikazio Ingeniaritza
The fabrication and characterization of an optical fiber refractometer based on Lossy Mode Resonances (LMR) is presented. TiO2/ poly (sodium 4-styrenesulfonate) coatings deposited on side-polished D-shaped optical fibers are used as LMR supporting coatings. LMRs are sensitive to the external medium refractive index and D-shaped optical fibers enable the observation of TE and TM LMR polarizations. These refractometers based on TE and TM LMR showed an average sensitivity of 2737 nm/RIU and 2893 nm/RIU respectively for a surrounding medium refractive index (SMRI) range from 1.35 to 1.41.
Open Access
Femtomolar detection by nanocoated fiber label-free biosensors
(American Chemical Society, 2018) Chiavaioli, Francesco; Zubiate Orzanco, Pablo; Del Villar, Ignacio; Ruiz Zamarreño, Carlos; Giannetti, Ambra; Tombelli, Sara; Trono, Cosimo; Arregui San Martín, Francisco Javier; Matías Maestro, Ignacio; Baldini, Francesco; Institute of Smart Cities - ISC; Ingeniería Eléctrica y Electrónica; Ingeniaritza Elektrikoa eta Elektronikoa; Gobierno de Navarra / Nafarroako Gobernua
The advent of optical fibre-based biosensors combined with that of nanotechnologies has provided an oppor-tunity for developing in situ, portable, lightweight, versatile and high-performance optical sensing platforms. We report on the generation of lossy mode resonances by the deposition of nm-thick metal oxide films on optical fibres, which makes it possible to measure precisely and accurately the changes in optical properties of the fibre-surrounding medium with very high sensitivity compared to other technology platforms, such as long period gratings or surface plasmon resonances, the gold standard in label-free and real-time biomolecular interaction analysis. This property, combined with the application of specialty structures such as D-shaped fibres, permits enhancing the light-matter interaction. SEM and TEM imaging together with X-EDS tool have been utilised to characterise the two films used, i.e. indium tin oxide and tin dioxide. More-over, the experimental transmission spectra obtained after the deposition of the nanocoatings have been numerically cor-roborated by means of wave propagation methods. With the use of a conventional wavelength interrogation system and ad-hoc developed microfluidics, the shift of the lossy mode resonance can be reliably recorded in response to very low analyte concentrations. Repeated experiments confirm a big leap in performance thanks to the capability to detect femtomolar concentrations in human serum, improving the detection limit by three orders of magnitude when compared with other fibre-based configurations. The biosensor has been regenerated several times by injecting sodium dodecyl sul-phate, which proves the capability of sensor to be reused.
Open Access
Ammonia gas optical sensor based on lossy mode resonances
(IEEE, 2023) Armas, Dayron; Zubiate Orzanco, Pablo; Ruiz Zamarreño, Carlos; Matías Maestro, Ignacio; Ingeniería Eléctrica, Electrónica y de Comunicación; Institute of Smart Cities - ISC; Ingeniaritza Elektrikoa, Elektronikoaren eta Telekomunikazio Ingeniaritzaren
This letter presents the fabrication and characterization of an ammonia (NH 3) gas optical sensor based on lossy mode resonances (LMRs). A chromium (III) oxide (Cr 2 O 3) thin film deposited onto a planar waveguide was used as LMR supporting coating. The obtained LMR shows a maximum attenuation wavelength or resonance wavelength centered at 673 nm. The optical properties of the coating can be modified as a function of the presence and concentration of NH 3 in the external medium. Consequently, the refractive index of the Cr 2 O 3 thin film will change, producing a red-shift of the resonance wavelength. Obtained devices were tested for different concentrations of NH 3 as well as repetitive cycles. Concentrations as low as 10 ppbv of NH 3 were detected at room temperature. Machine learning regression models were used to mitigate the cross-sensitivity of the device under temperature and humidity fluctuations.
Open Access
Lossy mode resonance-based optical immunosensor towards detecting gliadin in aqueous solutions
(Elsevier, 2023) Benítez Pérez, Melanys; Zubiate Orzanco, Pablo; Socorro Leránoz, Abián Bentor; Matías Maestro, Ignacio; Ingeniería Eléctrica, Electrónica y de Comunicación; Institute of Smart Cities - ISC; Ingeniaritza Elektrikoa, Elektronikoaren eta Telekomunikazio Ingeniaritzaren; Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa
The development of accurate, intuitive, and easy-to-handle devices to detect different types of allergens is on the rise, as these are useful tools to guarantee consumer safety, which should be a priority for any food industry. Gliadin, one of the main proteins present in gluten, is the one responsible for triggering the immune system to produce autoantibodies in celiac disease, the most dangerous pathology related to gluten. Lossy Mode Resonance (LMR) based biosensors are lately known as a promising sensing technology and its implementation on planar waveguides has been shown to result in manageable, sustainable and robust structures. In this work, an LMR based microfluidic biosensor for gliadin detection is proposed, by coating a coverslip with Titanium Dioxide (TiO2) by Atomic Layer Deposition (ALD) to generate the resonance phenomena and functionalizing the sensor surface with anti-gliadin antibody (AGA) through covalent bond. The sensor was exposed to different gliadin concentrations in ultrapure water, in the range of 0.1–100 ppm with an accuracy of ±0.14 ppm, for a sensitivity of 1.35 ppm/ml. The calibration curve was obtained from the experimental data corresponding to three repetitions of the assay and a limit of detection (LOD) of 0.05 ppm was achieved. Moreover, the sensor was exposed to commercial flour samples, some of them labeled as gluten free (GF) and the response agreed with the expected results according to product label. Biosensor specificity to gliadin was demonstrated by injecting chicken egg white albumin without obtaining any significant response.
Open Access
High sensitive refractometers based on lossy mode resonances (LMRs) supported by ITO coated D-shaped optical fibers
(Optical Society of America, 2015) Zubiate Orzanco, Pablo; Ruiz Zamarreño, Carlos; Del Villar, Ignacio; Matías Maestro, Ignacio; Arregui San Martín, Francisco Javier; Ingeniería Eléctrica y Electrónica; Ingeniaritza Elektrikoa eta Elektronikoa
Tin doped indium oxide (ITO) coatings fabricated onto D-shaped optical fibers are presented as the supporting medium for Lossy Mode Resonances (LMRs) generation. The characteristic geometry of ITO-coated D-shaped optical fibers enables to observe experimentally LMRs obtained with both TM and TE polarized light (LMRTM and LMRTE). This permits to obtain a maximum transmission decay of 36 dB with a LMR spectral width of 6.9 nm, improving that obtained in previous works, where the LMRs were a combination of an LMRTM and an LMRTE. Surrounding medium refractive index (SMRI) sensitivity characterization of LMRTM has been performed obtaining a maximum sensitivity of 8742 nm/RIU in the range 1.365-1.38 refractive index units (RIU) which overcomes that of surface plasmon resonance-based optical fiber devices presented in recent works.
Open Access
High sensitive and selective C-reactive protein detection by means of lossy mode resonance based optical fiber devices
(Elsevier, 2017) Zubiate Orzanco, Pablo; Ruiz Zamarreño, Carlos; Sánchez Zábal, Pedro; Matías Maestro, Ignacio; Arregui San Martín, Francisco Javier; Institute of Smart Cities - ISC; Ingeniería Eléctrica y Electrónica; Ingeniaritza Elektrikoa eta Elektronikoa; Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa
This work presents the development of high sensitive, selective, fast and reusable C-reactive protein (CRP) aptasensors. This novel approach takes advantage of the utilization of high sensitive refractometers based on Lossy Mode Resonances generated by thin indium tin oxide (ITO) films fabricated onto the planar region of D-shaped optical fibers. CRP selectivity is obtained by means of the adhesion of a CRP specific aptamer chain onto the ITO film using the Layer-by-Layer (LbL) nano-assembly fabrication process. The sensing mechanism relies on resonance wavelength shifts originated by refractive index variations of the aptamer chain in presence of the target molecule. Fabricated devices show high selectivity to CRP when compared with other target molecules, such as urea or creatinine, while maintaining a low detection limit (0.0625 mg/L) and fast response time (61 s). Additionally, these sensors show a repetitive response for several days and are reusable after a cleaning process in ultrapure water.
Open Access
Short single strand DNA detection by means of Lossy Mode Resonance based fiber-optic sensor
(IEEE, 2019-01-14) Zubiate Orzanco, Pablo; Ciáurriz Gortari, Paula; Tellechea Malda, Edurne; Santano Rivero, Desiree; Del Villar, Ignacio; Urrutia Azcona, Aitor; Arregui San Martín, Francisco Javier; Matías Maestro, Ignacio; Ruiz Zamarreño, Carlos; Ingeniería Eléctrica, Electrónica y de Comunicación; Ingeniaritza Elektrikoa, Elektronikoa eta Telekomunikazio Ingeniaritza; Institute of Smart Cities - ISC; Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa, PJUPNA26
Development of DNA and RNA biosensors and the associated diagnostic tests have gained growing interest in recent years. In particular, short RNA chains (around 25 oligonucleotides), known as micro RNAs, can be associated different stroke and neurodegenerative diseases. Here, we present the utilization of highly sensitive fiber optic sensor based on Lossy Mode Resonance (LMR) for the detection of single strand complementary DNA (ssDNA) associated to Huntington disease (Hsa-miR-34b).