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Publication Open Access Changes in the soil bacterial community across fairy rings in grasslands using environmental DNA metabarcoding(MDPI, 2025-04-29) Marí, Teresa; Manjón-Cabeza, José ; Rodríguez, Antonio; San Emeterio Garciandía, Leticia; Ibáñez, Mercedes; Sebastià, M.T.; Agronomía, Biotecnología y Alimentación; Agronomia, Bioteknologia eta ElikaduraFairy ring fungi are considered keystone species in grasslands due to their strong impact on soil physicochemical properties, but their effect on the associated bacterial community is poorly understood. Here, we analyze shifts in soil bacterial diversity and community composition across fairy rings using Illumina metabarcoding. A total of 254,135 MiSeq reads and between 405 and 1444 operational taxonomic units (OTUs) per soil sample were observed in a montane grassland in the Eastern Pyrenees. We found a strong reduction in all bacterial diversity indices inside the ring-affected zones compared to the outside grassland, especially in the stimulation (current ring) zone. The exception were Firmicutes, the dominant taxa in the grassland, which increased their relative abundance further in fairy ring-affected zones. The recovery of bacterial populations after the fungal front passage highlights the strong resilience of the bacterial communities to this biotic disturbance.Publication Open Access Broccoli (Brassica oleracea var. italica) biomass as a resource for obtaining glucosinolate extracts to control postharvest fungal diseases(Springer, 2025-05-27) Eugui Arrizabalaga, Daniel; Fernández San Millán, Alicia; Velasco, Pablo; Veramendi Charola, Jon; Rodríguez, Víctor Manuel; Poveda Arias, Jorge; Agronomía, Biotecnología y Alimentación; Agronomia, Bioteknologia eta Elikadura; Institute for Multidisciplinary Research in Applied Biology - IMABBroccoli (Brassica oleracea var. italica) is a crop of great agronomic and economic importance worldwide. Because its edible parts are the inflorescences, large quantities of non-commercial biomass are produced each year in the field and in the food industry. In order to develop a circular economy around the broccoli crop, the present work develops glucosinolates (GSL) extracts with antimicrobial capacity for postharvest use in tomato, apple and table white grape against fungal diseases produced by the pathogens Botrytis cinerea, Alternaria alternata and Penicillium expansum. GSL extracts from organic crop management reported a higher content of GSLs than conventional management. These extracts are not effective in the control of A. alternata and P. expansum, possibly due to the absence of sinigrin. Furthermore, the extracts were ineffective in the control of B. cinerea on table white grapes, possibly due to the non-climacteric fruit condition and an absence in the induction of ethylene-mediated plant defenses. However, intact GSL extracts were effective in controlling B. cinerea on apple, while the addition of myrosinase enzyme caused effectiveness also on tomato and apple. Therefore, obtaining GSL extracts with biopesticidal capacity against B. cinerea in postharvest could be a circular economy strategy for broccoli agriculture and industry.Publication Open Access Appropriate harvest maturity for exploitation of wild black raspberry (Rubus sp.) fruits during shelf life period from Rawalakot, Azad Jammu and Kashmir(AIMS Press, 2025) Hayyat, Sana; Maqbool, Mehdi; Hamid, Abdul; Shehzad, Muhammad; Anwar, Raheel; Horvitz Szoichet, Sandra Susana; Zahid, Noosheen; Khan, Muhammad Azam; Agronomía, Biotecnología y Alimentación; Agronomia, Bioteknologia eta ElikaduraBlack raspberries (Rubus sp.) are abundantly grown and distributed widely in temperate regions of Pakistan which shows rich plant diversity of fruit species. In this study wildly grown black raspberry fruits were harvested from Rawalakot at three different maturity stages and investigated for physical, biochemical and antioxidant properties. Random samples of wild black raspberry fruits from each maturity stage [turning (75% red, 25% green), full red (100% red), black (100% black)] were stored at room temperature (22 ± 2 °C, 46% RH) for maximum 7 days and analysed on alternate days. Results showed that fruit weight, total soluble solids, pH, vitamin C, total flavonoids, total phenols, total antioxidants and total anthocyanins increased whereas fruit firmness and titratable acidity levels decreased as maturity progressed from turning to black stage. During shelf life period, total soluble solids and pH increased, while fruit weight, firmness, total anthocyanins, total flavonoids and total phenols significantly decreased with shelf life period. Moreover, titratable acidity and vitamin C decreased by advancement in shelf life period. It is advisable that wild black raspberry fruits should be harvested at black stage if used for immediate consumption. However, raspberries can be harvested at full red stage to extend storage period without compromising on fruit quality.Publication Open Access Comparative enzymatic browning transcriptome analysis of three apple cultivars unravels a conserved regulatory network related to stress responses(BMC, 2025-04-12) Bielsa González, Francisco Javier; Grimplet, Jérôme; Irisarri, Patricia; Miranda Jiménez, Carlos; Errea, Pilar; Pina, Ana; Agronomía, Biotecnología y Alimentación; Agronomia, Bioteknologia eta Elikadura; Institute for Multidisciplinary Research in Applied Biology - IMABEnzymatic browning (EB) endangers the adaptation of apple fruit cultivars to new markets, affecting organoleptic properties and producing economic losses. Polyphenol oxidases and polyphenol compounds play a key role in EB development in apple. However, the regulation of apple response to EB remains to be uncovered. In this study, three apple cultivars with different EB phenotypes ranging from low to high browning in apple pulp were used to study transcriptomic changes over time after fresh cutting (0, 30 and 60 min). This study allowed the identification of 1448 differentially expressed genes (DEGs), revealing both shared and genotype-specific responses, particularly in the affected metabolic pathways associated with EB. At 60 min (T60 vsT0), 77 DEGs were shared by all genotypes, suggesting a conserved regulatory network. This network included genes encoding for protein families such as calcium-binding proteins, heat-shock proteins, redox-responsive transcription factors, WRKY family transcription factors, zinc finger family proteins and disease resistance proteins among others. A co-expressed gene cluster, identified through Weighed Gene Co-Expression Network Analysis (WGCNA), was found to correlate with EB and included 323 genes enriched in several biological terms according to Gene Ontology analysis. Moreover, a more detailed analysis of identified WGCNA gene cluster regulatory sequences allowed the detection of cis-regulatory elements belonging to CAMTA, WRKY and WUSCHEL transcription factor families. The identification of these sequences alongside with an abundant and diverse amount of overexpressed transcription factors from various families (WRKY, ERF, GRAS, GATA, etc.) point out to a highly regulated stress-response that is strictly connected to innate plant immunity. These findings provide valuable insights into the molecular mechanism involved in apple fresh-cut browning and offer new potential targets for EB regulation.Publication Open Access Alfalfa yield estimation using the combination of Sentinel-2 and meteorological data(Elsevier, 2025-03-19) Gámez Guzmán, Angie Lorena; Segarra, Joel; Vatter, Thomas; Santesteban García, Gonzaga; Araus, José Luis; Aranjuelo Michelena, Iker; Agronomía, Biotecnología y Alimentación; Agronomia, Bioteknologia eta Elikadura; Institute for Multidisciplinary Research in Applied Biology - IMAB; Gobierno de Navarra / Nafarroako GobernuaContext: Alfalfa (Medicago sativa L.) is one of the world's most important forages for livestock feeding. Timely yield estimates could provide information to guide management decisions to improve production. Since alfalfa crops typically undergo multiple harvests in a year and demonstrate rapid regrowth, satellite remote sensing techniques present a promising solution for alfalfa monitoring. Objective: To generate alfalfa yield estimation models at three phenological stages (early vegetative, late vegetative, and budding stages) using vegetation indices (VIs) derived from satellite Sentinel-2 images and their combination with meteorological data. Methods: We analyzed fields located in Navarre (northern Spain) over two consecutive seasons (2020 and 2021). To generate the yield estimation models, we applied a conventional multilinear regression and two machine learning algorithms (Least Absolute Shrinkage and Selection Operator - LASSO and Random Forest - RF). Results: Regardless of the statistical approach, the three phenological stages were not optimal when either VIs or meteorological data were used singularly as the predictor. However, the combination of VIs and meteorological data significantly improved the yield estimations, and in the case of LASSO model reached percentages of variance explained (R2) and normalized root mean square error (nRMSE) of R2= 0.61, nRMSE= 0.16 at the budding stage, but RF reached a R2= 0.44, nRMSE= 0.22 at the late vegetative stage, and R2= 0.36, nRMSE= 0.24 at the early vegetative stage. The most suitable variables identified were the minimum temperature, accumulated precipitation, the renormalized difference vegetation index (RDVI) and the normalized difference water index (NDWI). The RF model achieved more accurate yield estimations in early and late vegetative stages, but LASSO at bud stage. Conclusion: These models could be used for alfalfa yield estimations at the three phenological stages prior to harvest. The results provide an approach to remotely monitor alfalfa fields and can guide effective management strategies from the early development stages.Publication Open Access Effects of ozonation on the physicochemical properties and antimicrobial activity of virgin and pomace olive oils(Wiley, 2025-05-22) Domínguez-Lacueva, Paula; Corella Guillamón, Paula; Cantalejo Díez, María Jesús; Agronomía, Biotecnología y Alimentación; Agronomia, Bioteknologia eta Elikadura; Institute on Innovation and Sustainable Development in Food Chain - ISFOOD; Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa; Gobierno de Navarra / Nafarroako GobernuaOzonated olive oils are recognized for their remarkable antimicrobial properties. The reaction between ozone (O3) and unsaturated fatty acids leads to the formation of bactericidal compounds (ozonides, aldehydes, and peroxides) with valuable applications. This study represents the first comprehensive investigation into the effects of a wide range of ozone exposure durations (from 0 to 48 h) on the physicochemical properties and antimicrobial activity of both virgin olive oil (VOO) and pomace olive oil (POO), along with a thorough statistical analysis of the correlation between ozone dose and these parameters. The physicochemical indicators, including fatty acid methyl ester (FAME) composition, peroxide index, acidity index, iodine value, and viscosity, were measured at ozonation doses ranging from 0 to 1 mol O3. Significant changes were observed with increasing ozonation time, including a 69% and 46% reduction in oleic acid content, as well as increased peroxide values of 1255.2 mEq O₂/kg and 1878.8 mEq O₂/kg for VOO and POO, respectively. Antimicrobial activity was evaluated against Escherichia coli (STCC 45), Pseudomonas aeruginosa (STCC 109), and Staphylococcus aureus (STCC 239), with the highest inhibition observed against S. aureus (22.68 mm with POO at 48 h and 1 mol O3). PCA analysis identified three groups: low ozone doses (0–0.08 mol O₃) associated with higher iodine values; intermediate doses (0.16–0.5 mol O₃) linked to increased peroxide, acidity, viscosity, and antimicrobial activity; while high doses (1 mol O₃) provided no further benefits, suggesting that moderate doses are sufficient for effective antimicrobial activity. These findings highlight the potential of ozonated olive oils for novel applications in the food industry.Publication Open Access Effect of PUFAs-ω3 and ω6 on oxidative stress of sheep erythrocytes(BioMed Central, 2025-05-10) Pasciu, Valeria; Nieddu, Maria; Baralla, Elena; Contreras Solís, Ignacio; Sotgiu, Francesca Daniela; Berlinguer, Fiammetta; Agronomía, Biotecnología y Alimentación; Agronomia, Bioteknologia eta Elikadura; Institute on Innovation and Sustainable Development in Food Chain - ISFOODBackground: In recent years, the use of long-chain polyunsaturated fatty acids (PUFA) ω3 and ω6, as food supplements in livestock has increased due to their beneficial properties related to their antioxidant activity. It has been demonstrated however that a high intake of these substances has prooxidant and cell-damaging effects, especially if their circulating concentrations are unbalanced. Starting from these premises, and taking advantage of previous findings, the present study aimed at defining the optimal circulating concentrations and PUFAs ω3/ω6 ratio, to ensure the antioxidant/oxidant balance in sheep RBCs. Results: All tested concentrations (25–300 µg/mL in PBS) of PUFAs-ω3 after 4 h of treatment on sheep RBCs, showed antioxidant properties with a significant decrease in reactive oxygen species (ROS) versus the control group (CTRL) (p < 0.05). Furthermore, ω6 showed an antioxidant effect at low concentrations (25–200 g/mL) but a pro-oxidant effect at the highest concentrations (250 and 300 µg/mL) with a significant increase in ROS production (123.6 ± 2.1 and 131.4 ± 6.5% sloope RFU of CTRL respectively p < 0,001), malondialdehyde (MDA) (p < 0.01), and haemolysis (p < 0.01) versus CTRL group (1.1 ± 0.1%), and, also with a decrease of Trolox equivalent antioxidant capacity (TEAC) (p < 0,05). The ratio ω3/ω6 of 1:10 (25/250 µg/mL) and 1:4 (25/100 µg/mL) showed an intracellular ROS level like the CTRL group whereas, the ratio 1:2 (100/200 µg/mL) resulted in a significant decrease in ROS production (62.71 ± 2.31% slope RFU of CTRL, p < 0.001) and MDA (p < 0.001), with an increase in TEAC (p < 0.05), and a decrease haemolysis versus the control group (p < 0,01). Conclusions: Our results showed that a beneficial effect on the oxidative state of sheep RBCs was obtained with in vitro administration of low concentrations of ω6 and with all tested concentrations of ω3. The addition of ω6 at high concentrations leads to an imbalance in the PUFA ω3/ω6 ratio, compromising the oxidative state and viability of the RBCs. The maximum antioxidative effect was found at ω3/ω6 ratio 1:2).Publication Open Access Transfering sustainability competences through green pedagogies and service-learning in higher education(European Center of Sustainable Development, 2025-02-01) Cantalejo Díez, María Jesús; Martínez Aldaya, Maite; Navarlaz Fernández, Isabel; Ciencias; Zientziak; Agronomía, Biotecnología y Alimentación; Agronomia, Bioteknologia eta ElikaduraSustainability competences are reflected in the ability to look ahead to change and shape the future of the societies in which they live through active participation in the sense of sustainable development. Through service-learning, students take responsibility for their actions. The complex nature of sustainability issues makes it useful to explore problems and their solutions holistically. In the framework of the NEMOS project (A New Educational Model for Acquiring Sustainability Competences through Service-Learning), a collaborative process was initiated to pool the knowledge and experience of five Higher Education Institutions working together to implement new educational models for effectively acquiring sustainability competences through service-learning in food-related degrees. This EU-funded project was launched and aimed to advance the transition to sustainability education through practical and innovative educational approaches and interventions. Green pedagogy can support transformative learning through the exploration and clarification of learnersPublication Open Access Cubierta vegetal bajo las cepas: una alternativa al control de las malas hierbas en los viñedos(INTIA (Tecnologías e Infraestructuras Agroalimentarias), 2023) Abad Zamora, Francisco Javier; Cibriain Sabalza, Félix; Sagüés Sarasa, Ana; Santesteban García, Gonzaga; Lezáun San Martín, Juan Antonio; Fabo Boneta, Jesús María; Virto Quecedo, Íñigo; Imbert Rodríguez, Bosco; Marín Arroyo, Remedios; Garbisu Crespo, Carlos; Ciencias; Zientziak; Agronomía, Biotecnología y Alimentación; Agronomia, Bioteknologia eta Elikadura; Institute for Multidisciplinary Research in Applied Biology - IMAB; Institute on Innovation and Sustainable Development in Food Chain - ISFOODEn este artículo se presentan los resultados obtenidos con una cubierta vegetal de trébol sembrada bajo las cepas para competir con las malas hierbas, de manera que no sea necesario recurrir al empleo de herbicidas o laboreos intercepas.Publication Open Access La llegada de la carne artificial y sus consecuencias para la ganadería(Asociacion the Conversation España, 2021-02-02) Mendizábal Aizpuru, José Antonio; Agronomía, Biotecnología y Alimentación; Agronomia, Bioteknologia eta Elikadura; Institute on Innovation and Sustainable Development in Food Chain - ISFOODEn la actualidad existe un intenso debate sobre los hábitos alimentarios y su influencia en aspectos como la salud, la preservación del medio ambiente (biodiversidad, emisiones de gases de efecto invernadero, calentamiento global...) o el bienestar animal.Publication Open Access ¿Sigue siendo leche la leche?(Asociación The Conversation España, 2022-07-05) Mendizábal Aizpuru, José Antonio; Agronomía, Biotecnología y Alimentación; Agronomia, Bioteknologia eta ElikaduraLleva con nosotros millones de años. En forma de leche materna, es el primer alimento que recibimos los mamíferos; el único que en nuestras primeras etapas de vida es capaz de proveernos de los principios nutritivos imprescindibles para un adecuado desarrollo neuronal, óseo, muscular, amén de las inmunoglobulinas necesarias para dotar de defensas a los recién nacidos. Todo ello constituye la prueba irrefutable de que hablamos de un alimento sano, saludable, equilibrado y con innumerables propiedades beneficiosas para el ser humano. Quizás por eso, buena parte de la población opta por mantener en su dieta la leche de origen animal (de vaca, sobre todo) una vez superada la fase de lactancia. En forma de leche líquida o como derivados lácteos.Publication Open Access Qué dice (y qué no) el informe de la ONU sobre la carne(Asociación the Conversation España, 2019-09-08) Mendizábal Aizpuru, José Antonio; Agronomía, Biotecnología y Alimentación; Agronomia, Bioteknologia eta ElikaduraEl informe que el IPCC (Panel Intergubernamental de Expertos sobre el Cambio Climático, perteneciente a la ONU) publicó recientemente es exhaustivo y clarificador. El hecho de que hayan participado en su elaboración 107 expertos de 52 países da idea de su importancia y magnitud. Titulado El cambio climático y la tierra, el informe está estructurado en siete capítulos. En total 1384 páginas de texto, más abundante material suplementario. Conscientes de la dificultad que supone para los no expertos en el tema la lectura y el estudio de un texto de tal extensión, el IPCC ha elaborado un comunicado de prensa de siete páginas en varios idiomas, donde recoge las principales ideas y conclusiones del informe. Su lectura, por la transcendencia del tema y la concisión y claridad con que está escrito, resulta muy recomendable para todo ciudadano del mundo.Publication Open Access Characterization of a recombinant Sendai virus vector encoding the small ruminant lentivirus gag-P25: antiviral properties in vitro and transgene expression in sheep(BMC, 2025-03-07) Gómez, Álex; Glaría Ezquer, Idoia; Moncayola, Irati; Echeverría Garín, Irache; Arrizabalaga, Javier; Rodríguez Largo, Ana; Blas, Ignacio de; Lacasta, Delia; Pérez, Estela; Pérez, Marta María; Diego, Alicia de; Miguel, Ricardo de; Lee, Benhur; Luján, Lluís; Agronomía, Biotecnología y Alimentación; Agronomia, Bioteknologia eta Elikadura; Institute on Innovation and Sustainable Development in Food Chain - ISFOOD; Gobierno de Navarra / Nafarroako GobernuaSmall ruminant lentiviruses (SRLV) cause multisystemic chronic inflammatory disease and significant economic losses in sheep and goats worldwide. However, no vaccines or therapies are currently available. In this study, a recombinant Sendai virus (SeV) vector encoding the SRLV gag-P25 gene (rSeV-GFP-P25) from the EV1 strain was generated using In-FUSION cloning and rescued using the SeV reverse genetic system. Transgene expression and stimulation of innate immunity and interferon-stimulated genes (ovine A3Z1, OBST2 and SAMHD1) were evaluated in ovine skin fibroblasts (OSF) transduced with SeV-GFP and rSeV-GFP-P25. Additionally, to characterize the effect of the SRLV restriction in transduced OSF, the SRLV DNA load was quantified at different times post-transduction and post-infection with strain EV1. Using immunohistochemistry and image analysis, transgene expression and tissue distribution of recombinant P25 were studied in two lambs inoculated intranasally, one with rSeV-GFP-P25 and the other with SeV-GFP. rSeV-GFP-P25 induced efficient and transient transgene expression in vitro and in vivo. Furthermore, OSF transduced with rSeV-GFP-P25 presented upregulation of TLR2, TLR3, TLR6, TLR7, RIG-I, MyD88 and IFN-β, whereas SeV-GFP did not induce TLR6 or IFN-β upregulation. Among the interferon-stimulated genes, OBST2 was significantly upregulated after transduction with rSeV-GFP-P25 compared with the empty vector. SRLV restriction gradually increased and persisted after transduction with SeV-GFP and rSeV-GFP-P25, with OSF transduced three times showing cumulative restriction. Forty-eight hours post-inoculation in vivo, marked P25 expression was observed in ciliated epithelial cells and submucosal macrophages/dendritic cells of the nasal mucosa. This study reinforces the important role of the innate immune response in controlling SRLV infection and suggests that rSeV-GFP-P25 is a potential vaccine candidate against SRLV.Publication Open Access Unlocking Spanish pear genetic diversity: strategies for construction of a national core collection(Springer Nature, 2024-11-04) Irisarri, Patricia; Urrestarazu Vidart, Jorge; Ramos-Cabrer, Ana; Pereira-Lorenzo, Santiago; Velázquez-Barrera, María Encarnación; Díaz-Hernández, María Belén; Dapena, Enrique; Urbina, Valero; Dalmases, Josep; Ríos-Mesa, Domingo; Crespo Martínez, Sara; Loidi Erviti, Maite; Santesteban García, Gonzaga; Ascasíbar-Errasti, Javier; Errea, Pilar; Miranda Jiménez, Carlos; Pina, Ana; Agronomía, Biotecnología y Alimentación; Agronomia, Bioteknologia eta Elikadura; Institute for Multidisciplinary Research in Applied Biology - IMABSpanish pear germplasm collections are crucial for preservation, research, and breeding efforts. However, genetic diversity and structure is unknown at national level. A coordinated national project analyzed 1251 accessions from 7 Spanish pear collections using an internationally recognized set of 14 SSRs to enhance the utilization of these collections. Key findings included the identification of 760 unique genotypes (490 diploids and 270 triploids). Notably, genotypes represented by a single accession accounted for 49% of the total, indicating high vulnerability of this material. Using a Bayesian clustering method revealed two main genetic groups, G1 containing most foreign cultivars and G2 retaining local Spanish cultivars, which were further divided into two other subgroups using a nested approach, revealing moderate but significant differentiation among them. The populations were renamed according to the origin of the reference samples assigned to each group as 'South' (G1.1), 'Western Europe-1' (G1.2), 'Western Europe-2' (G2.1) and 'No-Pyrus communis' (G2.2). The results led to the creation of a 'generalist' collection, aiming to maximize genetic diversity representativeness, starting with 68 genotypes but expanding to 111 to achieve better allele recovery. This core collection is a valuable resource for genetic studies and conservation, enhancing efforts to preserve pear biodiversity.Publication Open Access Evaluating treatments for the protection of grapevine pruning wounds from natural infection by trunk disease fungi(American Phytopathological Society, 2024-09-19) Leal, Catarina; Bujanda, Rebeca; López-Manzanares, Beatriz; Ojeda, Sonia; Berbegal, Mónica; Villa Llop, Ana; Santesteban García, Gonzaga; Palacios Muruzábal, Julián; Gramaje, David; Agronomía, Biotecnología y Alimentación; Agronomia, Bioteknologia eta ElikaduraInfection of grapevines by fungal pathogens causing grapevine trunk diseases (GTDs) primarily arises from annual pruning wounds made during the dormant season. While various studies have showcased the efficacy of products in shielding pruning wounds against GTD infections, most of these investigations hinge on artificial pathogen inoculations, which may not faithfully mirror real field conditions. This study aimed to evaluate and compare the efficacy of various liquid formulation fungicides (pyraclostrobin + boscalid) and paste treatments, as well as biological control agents (BCA: Trichoderma atroviride SC1, T. atroviride I-1237, and T. asperellum ICC012 + T. gamsii ICC080), for their potential to prevent natural infection of grapevine pruning wounds by trunk disease fungi in two field trials located in Samaniego (Northern Spain) and Madiran (Southern France) over three growing seasons. Wound treatments were applied immediately after pruning in February. One year after pruning, canes were harvested from vines and brought to the laboratory for assessment of Trichoderma spp. and fungal trunk pathogens. More than 1,200 fungal isolates associated with five GTDs (esca, Botryosphaeria, Diaporthe and Eutypa diebacks, and Cytospora canker) were collected from the two vineyards each growing season. Our findings reveal that none of the products under investigation exhibited complete effectiveness against all the GTDs. The efficacy of these products was particularly influenced by the specific year of study. A notable exception was observed with the biocontrol agent T. atroviride I-1237, which consistently demonstrated effectiveness against Botryosphaeria dieback infections throughout each year of the study, irrespective of the location. The remaining products exhibited efficacy in specific years or locations against particular diseases, with the physical barrier (paste) showing the least overall effectiveness. The recovery rates of Trichoderma spp. in treated plants were highly variable, ranging from 17 to 100%, with both strains of T. atroviride yielding the highest isolation rates. This study underscores the importance of customizing treatments for specific diseases, taking into account the influence of environmental factors for BCA applications.Publication Embargo Effects of early, late and self-selected time-restricted eating on visceral adipose tissue and cardiometabolic health in participants with overweight or obesity: a randomized controlled trial(Nature Research, 2025-01-07) Dote-Montero, Manuel; Clavero-Jimeno, Antonio; Merchán Ramírez, Elisa; Osés Recalde, Maddi; Echarte Medina, Jon; Camacho-Cardenosa, Alba; Concepción Álvarez, Mara de la Caridad; Amaro Gahete, Francisco J.; Alcántara Alcántara, Juan Manuel; López-Vázquez, Alejandro; Cupeiro, Rocío; Migueles, Jairo H.; De la O, Alejandro; García Pérez, Patricia Virginia; Contreras-Bolivar, Victoria ; Muñoz-Garach, Araceli; Zugasti Murillo, Ana; Petrina Jáuregui, María Estrella; Álvarez de Eulate, Natalia; Goñi Gironés, María Elena; Armendáriz Brugos, Cristina; González Cejudo, María Trinidad; Martín-Rodríguez, José L.; Idoate, Fernando; Cabeza Laguna, Rafael; Carneiro-Barrera, Almudena; Cabo, Rafael de; Muñoz Torres, Manuel; Labayen Goñi, Idoia; Ruiz, Jonatan R.; Ciencias de la Salud; Osasun Zientziak; Institute on Innovation and Sustainable Development in Food Chain - ISFOOD; Ingeniería Eléctrica, Electrónica y de Comunicación; Ingeniaritza Elektrikoa, Elektronikoa eta Telekomunikazio Ingeniaritza; Agronomía, Biotecnología y Alimentación; Agronomia, Bioteknologia eta Elikadura; Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa; Gobierno de Navarra / Nafarroako GobernuaThe optimal eating window for time-restricted eating (TRE) remains unclear, particularly its impact on visceral adipose tissue (VAT), which is associated with cardiometabolic morbidity and mortality. We investigated the effects of three TRE schedules (8 h windows in the early day, late day and participant-chosen times) combined with usual care (UC, based on education about the Mediterranean diet) versus UC alone over 12 weeks in adults with overweight or obesity. The primary outcome was VAT changes measured by magnetic resonance imaging. A total of 197 participants were randomized to UC (n = 49), early TRE (n = 49), late TRE (n = 52) or self-selected TRE (n = 47). No significant differences were found in VAT changes between early TRE (mean difference (MD): −4%; 95% confidence interval (CI), −12 to 4; P = 0.87), late TRE (MD: −6%; 95% CI, −13 to 2; P = 0.31) and self-selected TRE (MD: −3%; 95% CI, −11 to 5; P ≥ 0.99) compared with UC, nor among the TRE groups (all P ≥ 0.99). No serious adverse events occurred; five participants reported mild adverse events. Adherence was high (85–88%) across TRE groups. These findings suggest that adding TRE, irrespective of eating window timing, offers no additional benefit over a Mediterranean diet alone in reducing VAT. TRE appears to be a safe, well-tolerated and feasible dietary approach for adults with overweight or obesity. ClinicalTrials.gov registration: NCT05310721.Publication Open Access Optimizing oilseed rape growth: exploring the effect of foliar biostimulants on the interplay among metabolism, phenology, and yield(Wiley, 2024-10-03) Ancín Rípodas, María; Soba Hidalgo, David; Picazo Rodríguez, Pedro Javier; Gámez Guzmán, Angie Lorena; Le Page, Jean-François; Houdusse, Diane; Aranjuelo Michelena, Iker; Agronomía, Biotecnología y Alimentación; Agronomia, Bioteknologia eta ElikaduraThe current agricultural system is in search of new strategies to achieve a more sustainable production while keeping or even increasing crop yield and quality. In this scenario, the application of biostimulants constitutes a potent solution. In the current study, the impact of a blue-green microalgal extract (MB) and a pig tissue hydrolysate (PTH) on rapeseed plants' development was characterized. Obtained results revealed a positive effect on yield parameters of plants treated with MB and, especially, PTH; this was associated to an improvement on the photosynthetic performance. Moreover, this study remarked the effects of biostimulants on plant phenology through their pivotal role in modulating developmental processes. More specifically, proteomic, metabolomic, and hormone content analyses revealed distinct alterations associated with the acceleration of phenology induced by biostimulant application. Additionally, some antioxidant enzymes and stress-related compounds were up-regulated upon MB and PTH treatments, indicating enhanced plant defense mechanisms in response to accelerated phenological transitions. Such findings highlight the intricate interplay between biostimulants and plant physiology, wherein biostimulants orchestrate rapid developmental changes, ultimately influencing growth dynamics. Altogether, the current study reveals that the application of both MB and PTH biostimulants promoted rapeseed plant phenology and productivity associated with an improvement in the photosynthetic machinery while boosting other physiological and molecular mechanisms.Publication Open Access Does the response of Rubisco and photosynthesis to elevated [CO2] change with unfavourable environmental conditions?(Oxford University Press, 2024-09-12) Ancín Rípodas, María; Gámez Guzmán, Angie Lorena; Jáuregui Mosquera, Iván; Galmes, J.; Sharwood, R. E.; Erice, G.; Ainsworth, E. A.; Tissue, D. T.; Sanz-Sáez, A.; Aranjuelo Michelena, Iker; Ciencias; Zientziak; Agronomía, Biotecnología y Alimentación; Agronomia, Bioteknologia eta ElikaduraClimate change due to anthropogenic CO2 emissions affects plant performance globally. To improve crop resilience, we need to understand the effects of elevated CO2 concentration (e[CO2]) on CO2 assimilation and Rubisco biochemistry. However, the interactive effects of e[CO2] and abiotic stress are especially unclear. This study examined the CO2 effect on photosynthetic capacity under different water availability and temperature conditions in 42 different crop species, varying in functional group, photosynthetic pathway, and phenological stage. We analysed close to 3000 data points extracted from 120 published papers. For C-3 species, e[CO2] increased net photosynthesis and intercellular [CO2], while reducing stomatal conductance and transpiration. Maximum carboxylation rate and Rubisco in vitro extractable maximal activity and content also decreased with e[CO2] in C-3 species, while C-4 crops are less responsive to e[CO2]. The interaction with drought and/or heat stress did not significantly alter these photosynthetic responses, indicating that the photosynthetic capacity of stressed plants responded to e[CO2]. Moreover, e[CO2] had a strong effect on the photosynthetic capacity of grasses mainly in the final stages of development. This study provides insight into the intricate interactions within the plant photosynthetic apparatus under the influence of climate change, enhancing the understanding of mechanisms governing plant responses to environmental parameters.Publication Open Access Impact of a dual treatment on resistant starch level and techno-functional properties of pea and faba bean flours(Wiley, 2024-10-25) Arroqui Vidaurreta, Cristina; Noriega Domínguez, María José; Ibáñez Moya, Francisco C.; Milagro, Fermín I.; Beriain Apesteguía, María José; Virseda Chamorro, Paloma; Agronomía, Biotecnología y Alimentación; Agronomia, Bioteknologia eta Elikadura; Institute on Innovation and Sustainable Development in Food Chain - ISFOOD; Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa; Gobierno de Navarra / Nafarroako GobernuaStarch-rich pulses' flours, which are rich in fiber and resistant starch (RS), can be an interesting gluten-free ingredient for the development of novel healthy foods. The study aims to increase the RS content of protein-reduced fraction of legume flours (pea [P] and faba bean [FB]) by the application of thermal (autoclaving-cooling) and dual (thermal plus high-hydrostatic pressure) treatments. Both treatments enhance the RS contents, reaching 6.8% in P flour after dual treatment. The techno-functional properties are dependent both on the type of flour and the treatment applied. A loss of water solubility (WS) and an increase in water binding capacity are observed. The WS index and emulsion activity remained unchanged or slightly changed, but emulsion stability decreased significantly. The viscosity of the samples is modified according mainly to the flour type. P flour is more affected by the dual treatment than FB flour, which is evidenced by the greater changes shown in RS, WS, and pasting properties.Publication Embargo Upgrading and validating a soil water balance model to predict stem water potential in vineyards(Elsevier, 2024-10-30) Mirás-Ávalos, José M.; Escalona, José M.; Pérez-Álvarez, Eva Pilar; Romero Azorín, Pascual; Botia, Pablo; Navarro, Josefa; Torres Molina, Nazareth; Santesteban García, Gonzaga; Uriarte, David; Intrigliolo, Diego S.; Buesa, Ignacio; Agronomía, Biotecnología y Alimentación; Agronomia, Bioteknologia eta Elikadura; Institute for Multidisciplinary Research in Applied Biology - IMABEfficient water management is pivotal for viticulture sustainability. Decision support tools can advise on how to optimize irrigation or on the feasibility of growing grapes in rainfed conditions, but reliable algorithms for assessing vine water status are required. In this context, the aim of the current study was to upgrade a soil water balance model specific for vineyards by incorporating meteorological, soil and vine vigor in equations that transform the fraction of transpirable soil water into midday stem water potential (Ψstem). The model's sensitivity to variations in the magnitude of input parameters was analyzed. Furthermore, the model was tested in a broad scope of Spanish vineyards with different grapevine cultivars (both red and white), rootstocks, plant age, soil and climatic conditions, and water regimes, totaling 129 scenarios. The model was only slightly sensitive to variations in the magnitude of most inputs, except for the fraction of transpirable water at which leaf stomatal conductance begin to decline. Moreover, the model satisfactorily reproduced the evolution of Ψstem over the growing season, although it slightly overestimated the measured ¿stem values, as the slopes of the fitted regression lines were lesser than 1 on most occasions, 76 out of 129. Nonetheless, the coefficients of determination for these relationships were greater than 0.9, except for 21 datasets. Mean errors averaged 0.024 ± 0.015 MPa, while root mean square errors averaged 0.27 ± 0.01 MPa. The index of agreement was greater than 0.75 in 51 datasets, with only three datasets showing an index of agreement lower than 0.5. Nevertheless, the deviations between observed and simulated Ψstem values did not alter the classification of the water stress undergone by grapevines. This upgraded model could constitute the core of a decision support system for water management in vineyards, applicable to both rainfed and irrigated conditions.