Person:
Arazuri Garín, Silvia

person.page.identifierURI

https://academica-e.unavarra.es/handle/2454/48567

Last Name

Arazuri Garín

First Name

Silvia

person.page.departamento

Ingeniería

person.page.instituteName

IS-FOOD. Research Institute on Innovation & Sustainable Development in Food Chain

ORCID

0000-0003-2300-7419

person.page.upna

2676

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Now showing 1 - 10 of 25

Open Access
Exploring the potential of hyperspectral imaging to detect Esca disease complex in asymptomatic grapevine leaves
(Elsevier, 2022) Pérez Roncal, Claudia; Arazuri Garín, Silvia; López Molina, Carlos; Jarén Ceballos, Carmen; Santesteban García, Gonzaga; López Maestresalas, Ainara; Ingeniaritza; Estatistika, Informatika eta Matematika; Agronomia, Bioteknologia eta Elikadura; Institute on Innovation and Sustainable Development in Food Chain - ISFOOD; Ingeniería; Estadística, Informática y Matemáticas; Agronomía, Biotecnología y Alimentación; Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa
Precise and reliable identification of specific plant diseases is a challenge within precision agriculture nowadays. This is the case of esca, a complex grapevine trunk disease, that represents a major threat to modern viticulture as it is responsible for large economic losses annually. The lack of effective control strategies and the complexity of esca disease expression make essential the identification of affected plants, before symptoms become evident, for a better management of the vineyard. This study evaluated the suitability of a near-infrared hyperspectral imaging (HSI) system to detect esca disease in asymptomatic grapevine leaves of Tempranillo red-berried cultivar. For this, 72 leaves from an experimental vineyard, naturally infected with esca, were collected and scanned with a lab-scale HSI system in the 900-1700 nm spectral range. Then, effective image processing and multivariate analysis techniques were merged to develop pixel-based classification models for the distinction of healthy, asymptomatic and symptomatic leaves. Automatic and interval partial least squares variable selection methods were tested to identify the most relevant wavelengths for the detection of esca-affected vines using partial least squares discriminant analysis and different pre-processing techniques. Three-class and two-class classifiers were carried out to differentiate healthy, asymptomatic and symptomatic leaf pixels, and healthy from asymptomatic pixels, respectively. Both variable selection methods performed similarly, achieving good classification rates in the range of 82.77-97.17% in validation datasets for either three-class or two-class classifiers. The latter results demonstrated the capability of hyperspectral imaging to distinguish two groups of seemingly identical leaves (healthy and asymptomatic). These findings would ease the annual monitoring of disease incidence in the vineyard and, therefore, better crop management and decision making.
Open Access
Phytochemicals determination and classification in purple and red fleshed potato tubers by analytical methods and near infrared spectroscopy
(Wiley, 2016) Tierno, Roberto; López Maestresalas, Ainara; Riga, Patrick; Arazuri Garín, Silvia; Jarén Ceballos, Carmen; Ruiz de Galarreta, José Ignacio; Proyectos e Ingeniería Rural; Landa Ingeniaritza eta Proiektuak
BACKGROUND: Over the last two decades, the attractive colours and shapes of pigmented tubers and the increasing concern about the relationship between nutrition and health have contributed to the expansion of their consumption and a specialty market. Thus, we have quantified the concentration of health promoting compounds such as soluble phenolics, monomeric anthocyanins, carotenoids, vitamin C, and hydrophilic antioxidant capacity, in a collection of 18 purple- and red-fleshed potato accessions. RESULTS: Cultivars and breeding lines high in vitamin C, such as Blue Congo, Morada and Kasta, have been identified. Deep purple cultivars Violet Queen, Purple Peruvian and Vitelotte showed high levels of soluble phenolics, monomeric anthocyanins, and hydrophilic antioxidant capacity, whereas relatively high carotenoid concentrations were found in partially yellow coloured tubers, such as Morada, Highland Burgundy Red, and Violet Queen. CONCLUSION: The present characterisation of cultivars and breeding lines with high concentrations of phytochemicals is an important step both to support the consideration of specialty potatoes as a source of healthy compounds, and to obtain new cultivars with positive nutritional characteristics. Moreover, by using near infrared spectroscopy a non-destructive identification and classification of samples with different levels of phytochemicals is achieved, offering an unquestionable contribution to the potato industry for future automatic discrimination of varieties.
Open Access
Siniestralidad agraria en España (2004 a 2013): factores de riesgo
(Blake & Helsey, 2019) Arnal Atarés, Pedro; Jarén Ceballos, Carmen; López Maestresalas, Ainara; Mangado Ederra, Jesús; Arazuri Garín, Silvia; Ingeniería; Ingeniaritza
Los datos del presente artículo son, en su mayor parte, los resultados encontrados por Pedro Arnal Atarés en el desarrollo de su tesis doctoral 'Análisis de la información sobre accidentes en el sector agrario recogida en los medios de comunicación en el decenio 2004-2013'. Esta tesis fue dirigida por Carmen Jarén Ceballos. Al objeto de conseguir el Doctorado en Prevención de Riesgos Laborales, la tesis citada se defendió el día 5 de septiembre de 2017 en la Universidad Pública de Navarra y obtuvo la calificación de Sobresaliente.
Open Access
Hyperspectral imaging using notions from type-2 fuzzy sets
(Springer, 2019) López Maestresalas, Ainara; Miguel Turullols, Laura de; López Molina, Carlos; Arazuri Garín, Silvia; Bustince Sola, Humberto; Jarén Ceballos, Carmen; Ingeniería; Ingeniaritza; Estadística, Informática y Matemáticas; Estatistika, Informatika eta Matematika; Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa
Fuzzy set theory has developed a prolific armamentarium of mathematical tools for each of the topics that has fallen within its scope. One of such topics is data comparison, for which a range of operators has been presented in the past. These operators can be used within the fuzzy set theory, but can also be ported to other scenarios in which data are provided in various representations. In this work, we elaborate on notions for type-2 fuzzy sets, specifically for the comparison of type-2 fuzzy membership degrees, to create function comparison operators. We further apply these operators to hyperspectral imaging, in which pixelwise data are provided as functions over a certain energy spectra. The performance of the functional comparison operators is put to the test in the context of in-laboratory hyperspectral image segmentation.
Open Access
Combination of spectral and textural features of hyperspectral imaging for the authentication of the diet supplied to fattening cattle
(Elsevier, 2024) León Ecay, Sara; Insausti Barrenetxea, Kizkitza; Arazuri Garín, Silvia; Goenaga Uceda, Irantzu; López Maestresalas, Ainara; Agronomía, Biotecnología y Alimentación; Agronomia, Bioteknologia eta Elikadura; Ingeniería; Ingeniaritza; Institute on Innovation and Sustainable Development in Food Chain - ISFOOD; Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa
This study explored the potential of hyperspectral imaging in the near infrared region (NIR-HSI) as a non-destructive and rapid tool to discriminate among two beef fattening diets. For that purpose, a feeding trial was carried out with a total of 24 purebred Pirenaica calves. Twelve of them were fed barley and straw (BS) while 11 animals were finished on vegetable by-products (VBPR). When comparing the reference measurements of the meat coming from those animals, only the total collagen ratio expressed the feeding effect (p-value<0.05). To undertake the authentication procedure, two discrimination approaches were run: partial least squares discriminant analysis (PLS-DA) and radial basis function-support vector machine (RBF-SVM). To precisely extract spectral and textural information from the lean portion of the meat steaks, various techniques were executed, such as principal component (PC) images, competitive adaptive reweighted sampling (CARS) for selecting optimal wavelengths, and gray-level-co-occurrence matrix (GLCM). After hyperspectral imaging and the combination of their own texture features, samples were classified according to feeding diet with an overall accuracy of 72.92% for PLS-DA and 80.56% for RBF-SVM. So, the potential of using HSI technology to authenticate the meat obtained from beef supplied a diet based on circular economy techniques was made in evidence.
Open Access
A multi-year analysis of traffic accidents involving agricultural tractors
(AIDIC, 2017) Arnal Atarés, Pedro; López Maestresalas, Ainara; Arazuri Garín, Silvia; Mangado Ederra, Jesús; Jarén Ceballos, Carmen; Proyectos e Ingeniería Rural; Landa Ingeniaritza eta Proiektuak
The agricultural sector in Spain is responsible for a high rate of accidents every year, and many of them are traffic accidents. Tractors are a relatively rare sight on roads, meaning that the incidence of accidents involving these vehicles is relatively low, however, an above-average number of people are seriously injured or killed as a result of such accidents. Tractors are considered responsible for the majority of the occupational accidents in agriculture. Moreover, tractor overturns stand out as the principal cause of fatal accidents mainly because those accidents involved tractors without rollover protective structures (ROPS). Despite the obligation for all tractors of having a protective structure, the incidence rate of accidents with sick leave followed a rising line in the last ten years. Thus, in this study an analysis of the data of traffic accidents involving agricultural tractors in Spain, during the 2004-2013 period, is developed in order to identify the main risk factors that influence them. Official data from the “Statistical Yearbook of Accidents” published annually were used. A total of 2892 accidents were analysed. The results obtained showed that the incidence rate of both accidents and deaths were lower in accidents involving tractors than in general ones, but the consequences were more severe. In addition, the majority of accidents producing victims happened in interurban roads involving two or more vehicles. Defects in the lighting and brake systems were identified as risk of producing an accident. In the majority of the cases, the driver was the only victim of the crash. The total number of victims showed a decreasing tendency while the fatality index remained constant. The age of driver was reported to directly influence the number of accidents, with a high proportion of drivers over 45 years old. The main offences committed by drivers were related to inadequate speed and distracted driving. As much as possible we put our findings in an international context.
Open Access
Analysis of fire services coverage in Spain
(DYNA, 2018) Echeverría Iriarte, Francisco Javier; González de Audícana Amenábar, María; López Maestresalas, Ainara; Arazuri Garín, Silvia; Ciriza Labiano, Raquel; Jarén Ceballos, Carmen; Ingeniería; Ingeniaritza; Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa
Previous analysis of the locations of fire stations in Spain and the extent of the areas they cover revealed significant deficiencies with regard to the proportion of communities who would not receive fire service intervention within a reasonable time period. This article discusses and describes the use of Geographic Information Systems and related tools to determine the areas and population covered by existing fire services within a specific response time. This response time by road, is based on a survey of fire service interventions in other European countries. The analysis compares data from a statistical study with georeferenced ones and demonstrates that the areas and communities not covered within this response time is greater than previously believed. The article then describes an analysis an alternative solution to reinforce the current fire stations network with part-time firefighters to cover the areas not covered mainly in rural and remote locations.
Open Access
Prediction of main potato compounds by NIRS
(AIDIC, 2017) López Maestresalas, Ainara; Pérez Roncal, Claudia; Tierno, Roberto; Arazuri Garín, Silvia; Ruiz de Galarreta, José Ignacio; Jarén Ceballos, Carmen; Proyectos e Ingeniería Rural; Landa Ingeniaritza eta Proiektuak; Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa
Potato (Solanum tuberosum, L) compounds are generally determined by analytical methods including gasliquid chromatography (GLC), HPLC and UV-VIS spectrophotometry. These methods require a lot of time and are destructive. Therefore, they seem to be not suitable for in-line applications in the food industry. Nearinfrared spectroscopy (NIRS) is a technique that presents some advantages over reference methods for quantitative analysis of agricultural and food products since it is fast, reliable and non-destructive. For this reason, in this study, quantitative analyses were carried out to determine main compounds in potatoes using NIRS. Potato tubers grown in two consecutive years were used for the analyses. NIR spectral acquisition was acquired on lyophilized samples. In year 1, a total of 135 samples were used while 228 samples were used in year 2. Lyophilized samples were also scanned by NIRS, two replicates per samples were acquired and the mean spectrum of each sample was used for the analysis. Different chemical analyses were carried out each year. Thus, in year 1 the following parameters were quantified: reducing sugars (RS) and nitrogen (N), whereas in year 2, total soluble phenolics (TSP) and hydrophilic antioxidant capacity (HAC) were extracted and quantified. Then, chemometric analyses were performed using Unscrambler X (version 10.3, CAMO software AS, Oslo, Norway) to correlate wet chemical analysis with spectral data. Quantitative analyses based on PLS regression models were developed in order to predict the above chemical compounds of tubers in a non-destructive manner. Good PLS regression models were obtained for the prediction of nitrogen and TSP with coefficients of determination (R2) above 0.83. Moreover, PLS models obtained for the estimation of HAC could be used for screening and approximate calibrations.
Open Access
Evaluation of risk factors in fatal accidents in agriculture
(Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), 2010) Arana Navarro, Ignacio; Mangado Ederra, Jesús; Arnal Atarés, Pedro; Arazuri Garín, Silvia; Alfaro López, José Ramón; Jarén Ceballos, Carmen; Proyectos e Ingeniería Rural; Landa Ingeniaritza eta Proiektuak
En el ámbito agrario se producen anualmente muchos accidentes mortales, no siendo todos ellos registrados oficialmente como accidentes laborales. El objetivo de esta investigación es comparar los datos reales y oficiales de accidentes agrícolas mortales y caracterizar los principales riesgos asociados a ellos. Un estudio sobre 388 accidentes mortales ocurridos en España con maquinaria agrícola en los últimos cinco años ha mostrado que sólo el 61,85% de ellos ha tenido carácter oficial. Las personas mayores fueron el sector de la población con un mayor riesgo, seguidos de los niños y las personas ajenas al sector agrario. La mayoría de las muertes registradas fueron debidas al vuelco de tractores sin estructuras de protección. De las 272 muertes causadas por accidentes con vuelco del tractor, sólo una sucedió en un tractor con estructura de protección homologada. La mayoría de los vuelcos se produjo en trayectos por carreteras o caminos, aunque las fuertes pendientes y los baches también son un factor de riesgo. Se han caracterizado once factores de riesgo y se ha comprobado que para que ocurra un accidente generalmente es necesario que confluyan, al menos, dos factores de riesgo y que la mayoría de los accidentes son causados por la concurrencia de tres o más de estos factores. Todos los accidentes son evitables porque requieren la coincidencia de más de un factor de riesgo. Si intentamos evitar todos los factores de riesgo, es posible que exista uno de estos factores, pero es muy difícil que concurran dos o más de ellos a la vez.
Open Access
Bulk optical of potato flesh in the 500 – 1900 nm range
(Springer US, 2015) López Maestresalas, Ainara; Aernouts, Ben; Van Beers, Robbe; Arazuri Garín, Silvia; Jarén Ceballos, Carmen; Baerdemaeker, Josse de; Saeys, Wouter; Proyectos e Ingeniería Rural; Landa Ingeniaritza eta Proiektuak; Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa
In this study, the optical properties of potato flesh tissue were estimated using double-integrating sphere (DIS) measurements combined with an inverse adding-doubling (IAD) light propagation model. Total reflectance, total transmittance, and unscattered transmittance were measured for the wavelength range 500– 1900 nm with 5-nm resolution. From these measurements, the bulk optical properties (absorption coefficient, scattering coefficient, and anisotropy factor) of 53 potato tubers of the Hermes cultivar were estimated. The estimated absorption coefficient spectra were dominated by water and starch absorption bands, the main chemical components of potato tissue. Comparison of these values to those reported in literature for similar products showed comparable absorption profiles. The obtained scattering coefficient spectra showed a smooth decrease from 166 to 160 cm−1 in the near-infrared (NIR) spectral range with increasing wavelength, which is common for biological tissues. The anisotropy factor spectra obtained for the full wavelength range studied ranged between 0.949 and 0.959 with a maximum variability of 0.009 among the set of samples used. The information obtained in this study is essential to understand the effects of absorption and scattering on the propagation of light through the potato tubers in order to design more efficient sensors for non-destructive quality evaluation.