• Mapping the Pleurotus ostreatus genome 

      Castellón Gadea, Jordi Upna; Pisabarro de Lucas, Gerardo Upna Orcid; Ramírez Nasto, Lucía Upna Orcid (Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa, 2006)   Contribución a congreso / Biltzarrerako ekarpena  OpenAccess
      Pleurotus ostreatus is a commercially important edible mushroom commonly known as oyster mushroom which has also important biotechnical applications. Industrial production of P.ostreatus is based on a solid fermentation process ...
    • Metatranscriptomics sheds light on the links between the functional traits of fungal guilds and ecological processes in forest soil ecosystems 

      Auer, Lucas; Buée, Marc; Fauchery, Laure; Lombard, Vincent; Barry, Kerry W.; Clum, Alicia; Copeland, Alex; Daum, Chris; LaButti, Kurt; Singan, Vasanth; Yoshinaga, Yuko; Martineau, Christine; Castillo Martínez, Federico Upna Orcid; Alfaro Sánchez, Manuel Upna Orcid; Castillo Martínez, Federico Upna Orcid; Imbert Rodríguez, Bosco Upna Orcid; Ramírez Nasto, Lucía Upna Orcid; Castanera Andrés, Raúl; Pisabarro de Lucas, Gerardo Upna Orcid; Finlay, Roger; Lindahl, Björn D.; Olson, Ake; Séguin, Armand; Kohler, Annegret; Henrissat, Bernard; Grigoriev, Igor V.; Martin, Francis M. (Blackwell Scientific Publications Ltd, 2023)   Artículo / Artikulua
      Soil fungi belonging to different functional guilds, such as saprotrophs, pathogens, and mycorrhizal symbionts, play key roles in forest ecosystems. To date, no study has compared the actual gene expression of these guilds ...
    • Molecular characterization of A cellobiohydrolase gene family in the fungus Pleurotus ostreatus 

      Eizmendi Goicoechea, Arantza; Sannia, Giovanni; Ramírez Nasto, Lucía Upna Orcid; Pisabarro de Lucas, Gerardo Upna Orcid (Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa, 2006)   Contribución a congreso / Biltzarrerako ekarpena  OpenAccess
      Cellulose is the most abundant biological polymer on Earth. Its chemical composition consists of D-glucose units linked by β-1,4- glycosidic bonds forming linear polymeric chains with a reducing and a non-reducing ...
    • Non-additive transcriptional profiles underlie dikaryotic superiority in Pleurotus ostreatus laccase activity 

      Castanera Andrés, Raúl Upna Orcid; Omarini, Alejandra; Santoyo Santos, Francisco Upna; Pérez Garrido, María Gumersinda Upna Orcid; Pisabarro de Lucas, Gerardo Upna Orcid; Ramírez Nasto, Lucía Upna Orcid (Public Library of Science, 2013)   Artículo / Artikulua  OpenAccess
      Background: The basidiomycete Pleurotus ostreatus is an efficient producer of laccases, a group of enzymes appreciated for their use in multiple industrial processes. The aim of this study was to reveal the molecular basis ...
    • Nutritional value of protein from vegetative mycelia of edible mushroom Pleurotus ostreatus 

      Parada Albarracín, Julián Andrés Upna Orcid; Urdaneta, Elena; Marzo Pérez, Florencio Upna Orcid; Ramírez Nasto, Lucía Upna Orcid; Pisabarro de Lucas, Gerardo Upna Orcid (Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa, 2006)   Contribución a congreso / Biltzarrerako ekarpena  OpenAccess
      The present work was designed to study the effects of supplementation a control diet with P. ostreatus mycelium for evaluation a nutritional value of mycoprotein and possible cholesterol lowering.
    • Quantitative trait loci controlling vegetative growth rate in the edible basidiomycete Pleurotus ostreatus 

      Larraya Reta, Luis María Upna Orcid; Idareta Olagüe, Eneko Upna; Arana, Dani; Ritter, Enrique; Pisabarro de Lucas, Gerardo Upna Orcid; Ramírez Nasto, Lucía Upna Orcid (American Society for Microbiology, 2002)   Artículo / Artikulua  OpenAccess
      Mycelium growth rate is a quantitative characteristic that exhibits continuous variation. This trait has applied interest, as growth rate is correlated with production yield and increased advantage against competitors. In ...
    • Relationship between monokaryotic growth rate and mating type in the edible basidiomycete Pleurotus ostreatus 

      Larraya Reta, Luis María Upna Orcid; Pérez Garrido, María Gumersinda Upna Orcid; Iribarren, Iñaki; Blanco Vaca, Juan Antonio Upna Orcid; Alfonso Esquíroz, Mikel Upna; Pisabarro de Lucas, Gerardo Upna Orcid; Ramírez Nasto, Lucía Upna Orcid (American Society for Microbiology, 2001)   Artículo / Artikulua  OpenAccess
      The edible fungus Pleurotus ostreatus (oyster mushroom) is an industrially produced heterothallic homobasidiomycete whose mating is controlled by a bifactorial tetrapolar genetic system. Two mating loci (matA and matB) ...
    • A secretomic view of woody and nonwoody lignocellulose degradation by Pleurotus ostreatus 

      Fernández Fueyo, Elena; Ruiz Dueñas, Francisco J.; López Lucendo, María F.; Pérez Boada, Marta; Rencoret, Jorge; Gutiérrez, Ana; Pisabarro de Lucas, Gerardo Upna Orcid; Ramírez Nasto, Lucía Upna Orcid; Martínez, Ángel T. (BioMed Central, 2016)   Artículo / Artikulua  OpenAccess
      Background: Pleurotus ostreatus is the second edible mushroom worldwide, and a model fungus for delignification applications, with the advantage of growing on woody and nonwoody feedstocks. Its sequenced genome is ...
    • Selection of Pleurotus ostreatus strains in a genetic breeding program 

      Idareta Olagüe, Eneko Upna; Jurado Cabanillas, Javier Upna; Pisabarro de Lucas, Gerardo Upna Orcid; Ramírez Nasto, Lucía Upna Orcid (Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa, 2006)   Contribución a congreso / Biltzarrerako ekarpena  OpenAccess
      The basidiomycete Pleurotus ostreatus, commonly known as oyster mushroom, is the second largest edible mushroom crop behind the white button mushroom, Agaricus bisporus. It accounts for nearly one-quarter of the ...
    • Somatic transposition and meiotically driven elimination of an active helitron family in Pleurotus ostreatus 

      Borgognone, Alessandra Upna Orcid; Castanera Andrés, Raúl Upna Orcid; Muguerza Domínguez, Elaia Upna; Pisabarro de Lucas, Gerardo Upna Orcid; Ramírez Nasto, Lucía Upna Orcid (Oxford University Press, 2017)   Artículo / Artikulua  OpenAccess
      Helitrons constitute a superfamily of DNA transposons that were discovered in silico and are widespread in most eukaryotic genomes. They are postulated to mobilize through a “rollingcircle” mechanism, but the experimental ...
    • Strain degeneration in pleurotus ostreatus: a genotype dependent oxidative stress process which triggers oxidative stress, cellular detoxifying and cell wall reshaping genes 

      Pérez Garrido, María Gumersinda Upna Orcid; Lopez-Moya, Federico; Chuina Tomazeli, Emilia; Ibáñez-Vea, María Upna Orcid; Garde Sagardoy, Edurne; López Llorca, Luis V.; Pisabarro de Lucas, Gerardo Upna Orcid; Ramírez Nasto, Lucía Upna Orcid (MDPI, 2021)   Artículo / Artikulua  OpenAccess
      Strain degeneration has been defined as a decrease or loss in the yield of important commercial traits resulting from subsequent culture, which ultimately leads to Reactive Oxygen Species (ROS) production. Pleurotus ostreatus ...
    • Telomere organization in the ligninolytic basidiomycete Pleurotus ostreatus 

      Pérez Garrido, María Gumersinda Upna Orcid; Pangilinan, Jasmyn; Pisabarro de Lucas, Gerardo Upna Orcid; Ramírez Nasto, Lucía Upna Orcid (American Society for Microbiology, 2008)   Artículo / Artikulua  OpenAccess
      Telomeres are structural and functional chromosome regions that are essential for the cell cycle to proceed normally. They are, however, difficult to map genetically and to identify in genome-wide sequence programs because ...
    • Transcriptional and enzymatic profiling of Pleurotus ostreatus laccase genes in submerged and solid-state fermentation cultures 

      Castanera Andrés, Raúl Upna Orcid; Pérez Garrido, María Gumersinda Upna Orcid; Omarini, Alejandra; Alfaro Sánchez, Manuel Upna Orcid; Pisabarro de Lucas, Gerardo Upna Orcid; Faraco, Vicenza; Amore, Antonella; Ramírez Nasto, Lucía Upna Orcid (American Society for Microbiology, 2012)   Artículo / Artikulua  OpenAccess
      The genome of the white rot basidiomycete Pleurotus ostreatus includes 12 phenol oxidase (laccase) genes. In this study, we examined their expression profiles in different fungal strains under different culture conditions ...
    • Transcriptome metabolic characterization of tuber borchii SP1-A new spanish strain for in vitro studies of the bianchetto truffle 

      Chuina Tomazeli, Emilia; Alfaro Sánchez, Manuel Upna Orcid; Zambonelli, Alessandra; Garde Sagardoy, Edurne; Pérez Garrido, María Gumersinda Upna Orcid; Jiménez Miguel, Idoia; Ramírez Nasto, Lucía Upna Orcid; Salman, Hesham; Pisabarro de Lucas, Gerardo Upna Orcid (MDPI, 2023)   Artículo / Artikulua  OpenAccess
      Truffles are ascomycete hypogeous fungi belonging to the Tuberaceae family of the Pezizales order that grow in ectomycorrhizal symbiosis with tree roots, and they are known for their peculiar aromas and flavors. The axenic ...
    • Transposable elements in basidiomycete fungi: dynamics and impact on genome architecture and transcriptional profiles 

      Castanera Andrés, Raúl Upna Orcid (2017)   Tesis doctoral / Doktoretza tesia  OpenAccess
      Transposable elements (TE), also known as mobile elements or transposons, are enigmatic genetic units that have played important roles in the evolution of eukaryotes. Their impact on genome architecture and phenotypic ...
    • Transposable elements versus the fungal genome: impact on whole-genome architecture and transcriptional profiles 

      Castanera Andrés, Raúl Upna Orcid; López Varas, Leticia Upna; Borgognone, Alessandra Upna Orcid; LaButti, Kurt; Lapidus, Alla; Schmutz, Jeremy; Grimwood, Jane; Pérez Garrido, María Gumersinda Upna Orcid; Pisabarro de Lucas, Gerardo Upna Orcid; Grigoriev, Igor V.; Stajich, Jason E.; Ramírez Nasto, Lucía Upna Orcid (Public Library of Science, 2016)   Artículo / Artikulua  OpenAccess
      Transposable elements (TEs) are exceptional contributors to eukaryotic genome diversity. Their ubiquitous presence impacts the genomes of nearly all species and mediates genome evolution by causing mutations and chromosomal ...
    • Transposon-associated epigenetic silencing during Pleurotus ostreatus life cycle 

      Borgognone, Alessandra Upna Orcid; Castanera Andrés, Raúl Upna Orcid; Morselli, Marco; López Varas, Leticia Upna; Rubbi, Liudmilla; Pisabarro de Lucas, Gerardo Upna Orcid; Pellegrini, Matteo; Ramírez Nasto, Lucía Upna Orcid (Oxford University Press, 2018)   Artículo / Artikulua  OpenAccess
      Transposable elements constitute an important fraction of eukaryotic genomes. Given their mutagenic potential, host-genomes have evolved epigenetic defense mechanisms to limit their expansion. In fungi, epigenetic modifications ...
    • Validation of reference genes for transcriptional analyses in Pleurotus ostreatus by using reverse transcription-quantitative PCR 

      Castanera Andrés, Raúl Upna Orcid; López Varas, Leticia Upna; Pisabarro de Lucas, Gerardo Upna Orcid; Ramírez Nasto, Lucía Upna Orcid (American Society for Microbiology, 2015)   Artículo / Artikulua  OpenAccess
      Recently, the lignin-degrading basidiomycete Pleurotus ostreatus has become a widely used model organism for fungal genomic and transcriptomic analyses. The increasing interest in this species has led to an increasing ...
    • VI Meeting on Genetics and Cellular Biology of Basidiomycetes (GCBB-VI) 

      Pisabarro de Lucas, Gerardo, ed. lit. Upna Orcid; Ramírez Nasto, Lucía, ed. lit. Upna Orcid (Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa, 2006)   Libro / Liburua  OpenAccess
      This volume summarizes the scientific communications presented at the 6th Meeting on Genetics and Cellular Biology of Basidiomycetes (GCBB-VI) held in Pamplona (Spain) from June 3rd to 6th, 2005. GCBB-VI continues the ...

      El Repositorio ha recibido la ayuda de la Fundación Española para la Ciencia y la Tecnología para la realización de actividades en el ámbito del fomento de la investigación científica de excelencia, en la Línea 2. Repositorios institucionales (convocatoria 2020-2021).
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